KEGG   Aegilops tauschii (wheat D): 109731939
Entry
109731939         CDS       T04345                                 
Name
(RefSeq) protein transport protein SEC13 homolog A
  KO
K14004  protein transport protein SEC13
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03013  Nucleocytoplasmic transport
ats04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109731939
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109731939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ats03019]
    109731939
   04131 Membrane trafficking [BR:ats04131]
    109731939
Messenger RNA biogenesis [BR:ats03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     109731939
Membrane trafficking [BR:ats04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    109731939
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    109731939
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    109731939
SSDB
Motif
Pfam: WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N Beta-prop_RIG_2nd Beta-prop_Vps41 ANAPC4_WD40 WDR55 Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_EIPR1 EIF3I NBCH_WD40 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR41 Beta-prop_NOL10_N Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 109731939
NCBI-ProteinID: XP_020146704
UniProt: A0A452XQ02
LinkDB
Position
1:complement(30031889..30035778)
AA seq 305 aa
MPPHKIETGHQDVVHDIAMDYYGKRIATASSDNTIKIIGVSGTSHQQLATLSGHEGPVWQ
IAWAHPKYGSMLASCSYDGRVIIWKEGSKPDEWAQAHTFNEHKSSVNSIAWAPHELGLCL
ACGSSDGNISVFMARSDGGWETTRIDQAHPVGVTSVSWAPSMAPGALISPGPSGQFEYVQ
KLASGGCDNTVKVWKLTNGSWRMDCFPALQMHRDWVRDVAWAPNLGLPKSTIASASQDGT
VVIWTAPKEGEQWEGRVLNDFRTPVWRLSWSLTGNILAVSDGNNNVTLWKEAVDGEWQQV
TTVEP
NT seq 918 nt   +upstreamnt  +downstreamnt
atgccgcctcataagatagagactggccaccaagatgtggtgcatgacatcgcaatggat
tactacgggaagcgtattgccactgcctcctctgataacacaatcaagatcattggcgta
agtggcacctcgcaccagcaacttgctactttgagcggacacgagggcccagtctggcaa
atcgcatgggctcatcccaagtatggttccatgcttgcatcctgcagctatgatggtcgg
gtcatcatatggaaagaagggagtaagcccgatgagtgggcacaggcacacactttcaat
gagcacaagtcttctgtcaattccattgcttgggcgcctcacgagctcggcctctgcttg
gcttgcggttcgtctgatgggaacatttccgtgttcatggctcgttctgatggagggtgg
gagacgacgcgcatcgatcaggcacatccagtgggcgtcacctctgtttcctgggcccca
tcaatggcgccgggcgctctaatcagtccagggccttctgggcagttcgagtacgtccag
aaacttgcttctggtggctgcgacaacacggtcaaggtgtggaagctcaccaacgggagt
tggaggatggactgctttcctgcccttcagatgcacagggactgggtgagggacgtcgcc
tgggcgccgaacctaggcctccctaagtccacgatcgccagcgcctctcaggatggaacc
gtcgtcatctggaccgcgccaaaagaaggcgagcagtgggaaggcagggtcctgaatgat
ttcagaacccctgtttggaggctgtcgtggtcgctgacgggcaacatcttggcggtctcc
gatggcaacaacaatgtgaccctctggaaagaagccgtcgacggcgaatggcagcaagtg
actaccgtcgagccatag

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