Aegilops tauschii (wheat D): 109733583
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Entry
109733583 CDS
T04345
Name
(RefSeq) serine/arginine-rich splicing factor SR30
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109733583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ats03041
]
109733583
Spliceosome [BR:
ats03041
]
Common components
Common spliceosomal components
SR proteins
109733583
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
109733583
NCBI-ProteinID:
XP_020148398
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Position
1:332222379..332227041
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AA seq
254 aa
AA seq
DB search
MSRRNGRTIYVGNLPEDIREREIEDLFYKYGPIVDIDLKIPPRPPVYAFVEFEDPRDADD
AIYGRDGYDFDGCKLRVELAHGGKGPSFDRPNSYTSSGRRGALRRSDYRVIVTGLPSSAS
WQDLKDHMRRAGDVCFSDVYPEAGAITGIVEYTNYEDMKHAIRKLDDSEFRNAFSRTYIR
VREYNARRSRSYSRSRSRSCSYSRSRSHSYSRSRSPRSSSRSLSPAAPARDKSASRSPIR
SRSLPRSQSPVKSE
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgagccgacgtaacggccgcaccatctacgtgggcaacctccccgaggacatccgcgag
agagagattgaggatctcttctacaagtacggtcctattgtcgatatcgatctgaaaatt
cctccaaggcctcctgtttatgcttttgtcgagtttgaagacccacgtgatgctgatgat
gcaatttatggccgtgatggatacgactttgatggctgcaaattgcgggtggagttagct
catgggggaaaaggcccttcttttgatcgaccaaacagctatactagttctggacgtcgt
ggtgcacttaggcgttctgattaccgcgttattgttaccggattaccttcttcagcatca
tggcaagatctcaaggatcatatgcggcgagctggtgatgtctgtttctctgatgtttat
cctgaggctggagcaattactggaatagttgagtataccaactacgaagacatgaaacat
gcgataaggaagcttgatgattcagagttccgtaatgcattttcacgcacatatatcagg
gtgagggagtacaatgctaggcgtagccgctcttactcgagaagtagaagccgaagctgc
tcttactcgagaagcagaagtcacagttatagcaggagcaggagtccaaggtcatcatca
agatccctatcacctgccgcacctgcgcgtgacaagtctgcaagcaggagccccatcagg
agcagaagtttaccccgttctcagtctcctgtgaaatctgagtga
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