KEGG   Aegilops tauschii (wheat D): 109733611
Entry
109733611         CDS       T04345                                 
Name
(RefSeq) splicing factor U2af large subunit A isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109733611
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ats03041]
    109733611
Spliceosome [BR:ats03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109733611
 Complex B
    109733611
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded RRM_PARP14_3 DUF4154
Other DBs
NCBI-GeneID: 109733611
NCBI-ProteinID: XP_020148427
LinkDB
Position
4D:complement(172225793..172233209)
AA seq 573 aa
MAEYEERYEGNAAAAVTGGSPPTKPSGFSDQPDGRSQQEVQSHEGSSSKSRERDRGREKD
KDTERDREHGRDRERGRDKDRERDRGDRDRERDRHHREHRERSEKREHRERSEKREHRGH
SDDHDRHRSRDHDIERRDRDRDGHRRHRSRSRSKGRERRSRSRSRSRSKSKRVSGFDQGP
SQAIPMVTPGATPGQLPAVTPLITGMLPNMFNFTAPTQFNPLVMQPQAMTQQATRHARRV
YVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASN
AMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRI
FVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALN
GIKMGDKTLTVRRANQGTSQPRPEQETILLHAQQQVQMQKLVLQVGGALPTKVVCLTQVV
SADELRDDEEYEDILEDMREEGRKYGNLVKAVIPRPDPSGAAVPGVGKVFLEYADIDGST
KAKVGMHGRKFGGNQVVAVFYPENKFADGDYDD
NT seq 1722 nt   +upstreamnt  +downstreamnt
atggccgagtacgaggagcgctacgagggcaacgccgccgccgccgtcaccggaggctcc
ccgccgaccaagccctccggtttctccgaccaacccgacggtcgctcccagcaggaggta
cagtcacatgagggaagctcctcaaaatctagagagagggacagaggacgagagaaggac
aaggacacggagcgtgatagagaacatggaagagatagagaaaggggccgtgataaggac
agggagagggaccggggtgaccgggaccgggaacgcgaccgccaccatagggagcaccgt
gaaagaagtgaaaaaagggagcaccgtgaaagaagtgagaaaagggagcaccgtggccat
tctgatgaccatgatcgtcatcgcagccgtgaccatgatattgaaagaagagaccgtgac
agagatggccatcgcaggcatcgctcccgctcccgttctaagggtcgtgaacgcagatcc
agatctcgttcgcgttctcgttcaaagagcaagcgggtgagcggatttgaccagggacca
tcgcaagccattcctatggttactcctggcgcgaccccaggtcagctgcccgcagttacc
cctcttattactgggatgcttccaaacatgtttaatttcactgctcctacgcagttcaat
cctctagttatgcaaccacaggccatgacacaacaggctacccggcatgctaggcgtgtt
tatgttggtggacttccaccaactgccaatgagcagacagttgctatatacttcaatcaa
gttatggctgctattggaggaaacacagctggtcctggtgatgctgttcttaatgtatac
ataaaccatgacaagaaatttgcttttgtggagatgaggtctgtggaggaagcaagcaat
gcaatggccttagatggtataatgtttgagggagcaccggtcaaagttagaaggccaaca
gactataatccttccctggctgctgcactgggtccaagccagccaaaccctaatctaaat
cttggtgctgttggcttgacacctggctcagctggaggtttagaaggccctgatcgcatc
tttgtgggtggcctcccgtactacttcaccgaggctcaagtgcgggagttgcttgaatcc
tttggaccgttgcgaggatttgatcttgtgaaggatagggagacaggcaactcgaaagga
tatgccttctgtgtataccaggatcttaatgtcaccgacattgcctgtgctgccctgaat
ggtatcaagatgggagacaagaccctcactgttaggcgagcaaatcaaggcacttctcaa
ccaaggccagagcaagaaaccatcctgttgcacgcacaacaacaagtgcagatgcagaaa
ctcgtgctacaagttggaggggctctaccgacaaaggtagtatgcctgacccaggtggtt
tcagcagatgaactgagagatgatgaggaatacgaggatattttggaagacatgagggaa
gaagggcgcaaatatggtaacttggttaaagctgtcatcccacgacctgaccccagcggc
gctgctgttcctggagttggaaaggtgtttctggaatatgcagatatcgacggctcgacc
aaggcgaaggtcgggatgcatggcaggaagtttggcgggaaccaggtggtggccgtgttc
tatcctgaaaacaagtttgctgatggagattacgatgattag

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