Aegilops tauschii (wheat D): 109734022
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Entry
109734022 CDS
T04345
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109734022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ats03021
]
109734022
Enzymes [BR:
ats01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109734022
Transcription machinery [BR:
ats03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
109734022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
109734022
NCBI-ProteinID:
XP_020148824
LinkDB
All DBs
Position
5:complement(556672394..556687382)
Genome browser
AA seq
1657 aa
AA seq
DB search
MEQEQATSVEVDSILFGFYTDDEVRRLSVKRLTRSERLDAKNCPVPGGLLDPAMGPVNAN
DTCKTCAQQPGDCPGHFGHIELSKPLFNPLLFDTLRDLLRSTCFTCRKFRLSAQLVDRYA
RELELLARGDVVQAKNLQDSAVSEESVEMDEDGSVDKPASPSDRGNKTWTSIQLKEAHSI
FSKLMKKRVNKCANCGMKNPPIKCQIYGWLTIQGTDGSAVRRKAITDYNLEGDRHISNPN
GTGVSGLTDDRVKASSNQTKDLSDDRPLLTTEVESILKDLWEKEARFCMLLCDFQQNLCV
SEKRRGYEMFFLKSMLVPPNRFRPSTSSSLGIMEHPQNVMLSKVQEANLALQHDSAHPNH
MDVLTRWRDLQTSVNLFYDSSKGLGKSGKDGHGVRQLVDKKTGIVRQKIMGKRVNHSCRT
VISPDPFLAVNEIGIPPAAALKLTYPEKVTPWNAKKLQGAISNGSEIHPGATHLKVNNQK
YKLQDERTKRRGIAKMLAASRGSISQPGKDPKCEFESKVVYRHIQDGDIVLVNRQPTLHK
PSMMAHVVRVLPGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAINIVDANKQY
IGPRSGEAVRGLIQDHIVGAVLLTKVDTFLSREEYSQLVYGSCVSSSRGPCQSGKRVSIV
KDDDTLELLPPAFVKPERWTGKQVITTILNHLTKGHPPFTVEMKGKISVQYLTAKVRHVA
EGEKLRDPEELVLYIRHNELLKGMIDKNQFGNHGIVHTVHELYGADTAGRLLSIFSRLFT
LFLQFHGFTCGIDDLLLSQESNNERTDFLSRSEEHSEEAHKKFLCKKDVDTDRVELQMNV
EKVVRRIGESANVALDKAMLSELNGLTTKVNKNMFPYGLQKPFPKNCLTLMTATGAKGGD
VNMTQISSLLGSQDLEGARVPRMISGKSLPCFPPWDSSSRAGGYVSDRFLTGLRPQEYYF
HCMAGRNGLIDTAVKTSRSGYLQRCLIKSLESLFVSYDHSVRNVDGSIIQFCYGEDGVDV
HKSSFLKKFKELADNRKAVSDRLAGYKGELEMYNGDPLSFKSKYITKLPQGLTESATGFH
KENKCCCRKLKKKCRCRYNINEEELMKLLKVKYVASLVDPGEAVGVILAQSLGEPSTQMT
LNTFHLAGRGDMNVTLGMPRIQEILMKASANIGTPYMKCPVHKGKKRKDAACLAEKLRGV
TLADVVEGIEVCTVPFHNSNGHISSLYKLHLKLFSPDCYPPESELTVDECQASLRTVFVD
AMEYAIEKHLNLLHKVSGIQETRVKDTESLPSEGPEESEGRPTNGDESDTSDGDDENEDD
LGADAEKRKRQENDEMEYEDDIENEDGMNSDPDEETKHELDNEDDPAESGVESEENDEGH
LSDSSNKTAKLEGRLAATKLKKERNETVENLQEQKQAQITQKRSKKLKLTVHVESADLNF
EVHYILHKEPHILLSQIAQKTLRSLFVSGSHNKNIGLCNVIWPEKKKKGETETKQKEKER
KEAFRGLQTAGLDFEVFWDLQDFLNVRKLTSNDIHAMLRTYGVEAARATIINEVKAVFEP
FGIKVDPRHLSLAADYMTSGGSYRPMNSLGMARFCTSPFGKMSFEQATRFIMEAAYHGEV
DNLTGPSATVSLGKPAKTGTGAFGLMQNITLEERAVM
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggagcaggcgacgtcggtggaggtggactccatcctcttcggcttctacacc
gacgacgaggtccggcggctcagcgtcaagcggctcaccaggtccgagcgcctcgacgcc
aagaactgccccgtgcccggcggcctgctcgaccccgccatgggccccgtcaacgccaac
gacacctgcaagacctgcgcgcagcagcccggcgactgccccggccacttcggccacatc
gagctctccaagccgctcttcaacccgctgctcttcgacaccctccgggacctcctccgc
tccacctgcttcacctgccgcaagttccgcctcagcgcccagctggtcgacaggtacgcc
cgcgagcttgagctgctggcgaggggcgatgttgtccaggccaagaacttgcaagattcc
gctgtttcggaggaaagcgttgaaatggacgaggacgggtcagttgataaaccggcgtcc
ccttctgaccgagggaacaaaacctggacatccatccagttgaaagaggcccattccatc
ttctccaagctgatgaaaaagcgggtgaacaagtgtgcaaactgcggcatgaagaaccca
cctatcaaatgccagatatatggttggctcacgattcagggtacagatggttctgctgta
agaagaaaagcaatcactgattataatcttgaaggagatcgccatatttccaacccaaat
ggaactggtgtttctggtcttacggatgatagagttaaagcatcaagcaatcaaacaaaa
gacctttctgatgatagacctctcttgactacggaggttgaatctattctcaaagacctg
tgggaaaaggaagccaggttctgcatgttactatgcgactttcagcagaatttatgtgta
tcagaaaagaggaggggctatgagatgtttttcttgaagagtatgcttgtgccaccaaat
agattccgtccttcaaccagctctagccttggaattatggaacatccacaaaatgttatg
ctaagtaaagtgcaagaggccaatcttgcactacagcatgacagtgcccatccgaatcac
atggatgttcttacaagatggagggatctgcaaacaagtgtaaatttattttacgatagt
agtaaaggccttggaaaaagcgggaaagacggtcatggtgtacggcaattggtggataag
aaaactgggatagttcgacagaaaataatgggcaagagagttaatcattcctgccgtacg
gttatatctccggatccgtttttagctgttaacgaaattgggattcctcctgctgctgct
ttaaagctgacttaccctgagaaagtgacgccctggaatgccaaaaagctacaaggagct
ataagtaatggctcggaaattcatcctggtgcgacacacttaaaggttaacaatcagaag
tataaattacaggatgagcgtaccaaacgtcgtggcattgcaaagatgttggctgcttct
agaggatcaatttctcaaccagggaaggaccctaaatgtgaatttgaaagcaaagttgta
tatcgacatattcaagatggtgacattgtactggtcaacagacagcctactcttcacaag
cccagcatgatggcccatgttgttcgtgtgttgcctggagagaagacaattcgaatgcac
tatgccaattgcagtacatacaatgctgattttgatggggatgaaatgaatgtgcacttc
cctcaagatgaaatatctcgggctgaggccatcaacattgttgatgcaaataagcaatac
attggtccaaggagtggggaggctgtaagaggtctcattcaggaccacattgttggtgct
gttctcctgacaaaagtggacacattcttgagccgtgaggaatacagtcagcttgtctat
gggtcttgtgtgtcctcatctcgtggtccttgtcaatctggtaaaagggtatctattgtg
aaggatgatgacacattggaacttcttcctccagcttttgtgaagccagagcggtggacg
ggaaaacaggtcataacaaccatcttgaaccatttaacgaaaggccacccaccatttact
gtggagatgaaagggaaaatttcagtacaatatctaacagctaaagtacgccatgttgct
gaaggagaaaaacttagagatcctgaagaactagttttatatattcgccataatgagctc
ttaaagggcatgatagacaagaaccagttcgggaatcacgggatagtacatacagttcat
gaactctatggtgcagatacagctggaagattgctctcgattttcagccgcttgtttaca
ttgttcttgcagtttcatggatttacttgtggaatagatgatctgttactatcccaagag
tcaaataacgagaggacggattttttgtcgagaagtgaggaacacagtgaagaagcgcat
aagaaatttctgtgcaagaaagatgttgatacagatcgagtggaattgcaaatgaacgtc
gaaaaggttgttcggagaataggagaatctgcgaacgttgcgttggataaagcaatgtta
agtgaactaaatgggttaacaactaaggtcaataagaacatgtttccctatggtctacaa
aagccctttcctaaaaattgtctcactcttatgactgcaactggagcaaaaggaggcgat
gttaacatgacacaaatctcgtcattgctaggctcacaagatttagaaggagcgcgtgtt
ccacgaatgatatctgggaagtcattaccttgctttccaccatgggatagttcttcaaga
gctggtggttacgttagtgacagatttttaactggtctccgccctcaagagtactatttc
cattgtatggctggcagaaatgggttgattgacacagcagtcaaaacatctcgtagtgga
tatcttcagcgttgtcttatcaaaagtctcgaatcattgtttgtttcatatgatcactct
gtgcgtaatgttgatggatcaatcatacaattctgctatggagaagatggagttgatgtc
cataaaagtagctttctcaaaaagtttaaagaactcgctgataatagaaaagctgtgtct
gacaggcttgcggggtacaagggtgagcttgagatgtacaatggtgatcccctgtcattc
aagtccaaatacattactaaactgcctcaaggactcaccgaaagcgcaacgggttttcat
aaagaaaacaagtgttgctgccgtaagcttaaaaaaaagtgtcgctgccgttataacatc
aatgaggaggaactaatgaagttactgaaagtcaagtacgtggctagtcttgtagatcct
ggtgaagctgttggtgtgatccttgctcagtccttaggagaaccttcaacgcagatgacg
ctcaacactttccatcttgctggaagaggggacatgaatgtcacacttgggatgcctcgc
atacaggaaatcctaatgaaagcatcggctaatattggcacgccttatatgaagtgcccg
gtgcataaaggcaagaagaggaaggatgctgcatgtctggctgaaaaactaaggggtgtt
acgttggctgatgttgtggaaggaattgaagtatgcacagttccttttcacaacagtaat
gggcatatttcgagtctctataagttgcatctaaaactattctcacccgactgttaccct
cctgagtcggaacttacagtagatgagtgtcaagcatccttgagaactgtgtttgttgat
gcaatggaatatgcaatcgaaaaacacctaaatttgctacacaaagttagtggaatccag
gaaacaagggtaaaggacactgagagtttaccatcagaaggtcctgaagaatccgagggc
agacctaccaacggggacgagtctgatacgagtgatggtgacgatgaaaatgaggatgac
ttgggagctgatgcagaaaagaggaaacgacaagagaatgatgagatggagtatgaggat
gatattgaaaatgaagatggcatgaacagtgaccctgatgaagagacaaaacatgaactt
gataatgaggatgatccagctgagtctggtgttgaatcagaagagaatgacgaaggacat
ttgtcagattccagtaacaagactgcaaaattagaaggcaggcttgcagctactaaactc
aagaaagagagaaatgaaacggtggaaaacttgcaggagcagaagcaggcacaaataacc
cagaaacgcagcaaaaagttaaaactgactgttcatgttgaaagtgcagatttgaatttt
gaggttcactacatcttgcacaaggaaccacatattttactatcccagattgcccagaag
actttgaggtccctatttgtcagtggatcccataacaaaaacataggtctatgtaatgtt
atttggccagagaagaaaaagaaaggtgaaactgaaaccaaacaaaaagagaaagagagg
aaagaagcctttcgagggctgcaaacggcaggactggactttgaggtattctgggatctg
caggacttcctgaacgtccgcaagcttacatctaacgacatacatgctatgttgaggaca
tacggggtggaggctgcgagggccaccatcattaacgaggtgaaggccgtgtttgagccc
tttggcatcaaggtagacccgaggcacctgagcctggcggctgattacatgacctcggga
ggctcctaccgaccgatgaacagcctcgggatggcccggttctgcacgtcgccgtttggc
aagatgagcttcgagcaggccacgaggttcatcatggaggcggcctaccatggggaggtg
gacaacctcacgggcccttcggcgaccgtgtccctggggaaaccggccaagaccgggacc
ggtgccttcgggctgatgcagaatatcaccctggaggagcgggcggtgatgtaa
DBGET
integrated database retrieval system
