Aegilops tauschii (wheat D): 109734520
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Entry
109734520 CDS
T04345
Name
(RefSeq) uncharacterized protein
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109734520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ats04131
]
109734520
Membrane trafficking [BR:
ats04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109734520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
WDR55
WD40_CDC20-Fz
Clathrin
ANAPC4_WD40
TPR_Vps41
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_WDHD1_1st
TPR_VPS8_2
Beta-prop_TEP1_2nd
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_Gbeta
Beta-prop_Aladin
zf-RING_2
Beta-prop_IFT140_1st
zf-RING_Vps41
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
109734520
NCBI-ProteinID:
XP_073357108
LinkDB
All DBs
Position
6:complement(56766729..56780444)
Genome browser
AA seq
1918 aa
AA seq
DB search
MPSSSPAMATQPPPRPPAQELDLDAFLPSSPASSSASDADADHRRAVDDLLLLLSSSDSE
GDDEPTRTPATNLKPLTRIKAPPPPPKPSPPSPLPSPSASPGRSTSASPSATLSSLVSRT
FSSNAASSSTSSSRPLPSLFRGVRPSPKPGAALAAAAAASRAVLTPHAAAIKSRRTASAP
IEKLLDEGSGSEASEGILSTGNFEAEKVAEKVSEEVVARVTEEAVGGSGGEELEEDKHGE
VGTEENSEPSELVNLGNVDSAAVDEQEQLGGENLAETYQVGSQIGLVDEENSDEQLSDGN
LAESGEIVDQDGSVSEEKTDDGLEVERSDTDLEEQLESEHIIDKVIEERLEISRLAEKNA
EKRPKVPMKPLERAEELEKRQASFGQHWEEGAAAQPMHLEGIGKGQPAIGYMQIDVDNPI
TRAMASPSFRQDHGSPQVLAVHRSYIAMGMSTGSVIIVPSKYSIHQADDTDAKMLFFWNQ
GEKTQSPVTAMCFNLQGDLLLVGYGDGHMTIWDVQKATAAKVIYGEHTGAVVHVCFIRQS
KVITGDSKGLVLLHTFSIIPVINRLTVKGTQRLFDGNTGIVLSACPLLADESFGSGNSST
QGNLPTSSSGGLGSMMGGVVGVDSGWKFFNEGSSPLEDGVTVMFIMHQHALVVRLRTNID
HVDHIENFSRPEGAREGSIAYAAWKYTSSSTDSSPIDEERVSWLALAWDRQVQVAKLVKS
KMIRHKDWKLDSAAVGIAWLNDQMLAVLNLKGQLCLFSKDGSELRRTIFILDGFVFDDSI
LYHTHFSNRFGNPERHFNNSVAVRGATVYILGPSFLTVSRLLPWKERIEALKMAGDWMGA
LDMAMKLYDGHTQGVVDLPRTVDSIRGAIMPYLVELLLSYIGYVFEYISIALSNHTGKGG
AIDGLIDADRSLLTQREEQYARVGGVAVEFCVHIGRNDILFDTVFSKFVAAQSGGIFLEV
LEPYILKDMLGSLPPEIMQALVEHYSGKGWLQRVEQCILHMDISSLDFNQVVRLCREHGL
YGALIYLFNQGLNDFRTPLEELLSVIQNATRKDATSTCYRMLVYLKYCFQGLAFPPGHGT
IPRAQLHAVRKELLQFMLEDSKMLTSEVFKGFSSSSGKCPNICYLLWMDTEATLEVVKCA
FAQENFEPTSSTLDASVSKDEEDTDIESPDSQNILLQSVVDAIIHIVGLENEAIHSVVVG
TAESEESELWPSVSDFGHIVEFVSFFVSYKRANASQRVLKHILKYLTSSTTSYDDKKMPP
QKEVLQLFNVVPQTDWNSDYVLNLCLDAHFHQACGMIYTARNQNLAALDSYMKDTMEPYH
AFIFINKKLLQLASDEALSFRSTVISRFAELVNLSRECAFVLVIDHFHDEIQQILAELHS
DHCSLFLFLKTAIEVHLSGKLDFSELTARNYEIVESLYSGDLEDYLQRLSNLPKLFDRNP
ISMTDKLVELYLELLCQYEPRSVLKFLETFDSYRLERCLLLCLDYGVTDAAAFLQERVGD
VASALELVLAGLDEKVNQFIASVENAFSRTSSKSISEIEQPDIVLNMSEARPVLDVLRSS
IGLCQRNSQRLDPEESQLLWFQLVDNFSDPLKKLYGSKVVNGKGCWSVGGETTNGHPTGK
GFSQKMVNSAYQRCLNTLRRVFSQFVGEIIEAMAGYIPLPAIMAKLLSDNGSQEFGDFKL
VIHRMLSMYLYEKRILETAKSVIEDDSFYTLSLLKRGVCHGFAPQTFVCCVCNCSLSKEG
AISAVRVFSCGHATHLHCESEQSKSSNKDFKDGCPVCLSMSDTQARNKSPILAENGLPKY
PVVEHEVPYGVHHNHETDHVERSRGLHQMSRFEILNNLQKGQKSFHIETVPPLKLSPPAI
YHEKIQKRVSLVGESSRHSVRSGKPQKIWHMKEPKSKKSGNWLPPKSSIFSSDKNQVQ
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgtcgtcgccggcgatggcaacccagccaccgccgcggccaccggctcaggag
ctcgacctagacgccttcctcccgtcgtctcccgcctcctcctcagcctccgacgccgac
gccgatcaccgccgcgccgtcgacgacctgctgctcctcctctcctcctccgactccgaa
ggcgacgacgagccaacccgtacgcccgccaccaacctcaaacccctaacccgtatcaaa
gccccaccgccgccccctaaaccttctcccccatctcctctgccatcgccttccgcttcc
cccgggagatccacatccgcgtcgccgtcggcgacgctctcctccctcgtctcgagaacc
ttttcgagcaacgctgcttcctcatccacctcctcgtcgaggccgctcccctcgctcttc
cggggtgtccgccccagccccaagcccggcgccgccctggccgcggcggcagccgcctcc
cgcgccgttctcaccccgcacgcggctgcaattaagtcgcggcgcacggcctccgcgccc
atcgagaagctcctcgacgagggctccggctccgaagcctcggaggggatcctttccact
ggaaatttcgaagcagagaaagtagctgagaaggtcagtgaggaagtggttgctagggtg
accgaggaagctgtcggtgggagtgggggtgaagaattggaagaggacaagcatggggaa
gtggggactgaagagaattccgagccctccgaattggtgaacctaggcaatgtcgattct
gctgctgtggatgagcaggagcaacttgggggcgagaatttagcagaaacatatcaagtt
gggagtcaaattgggcttgttgatgaagaaaatagtgatgagcaacttagtgacggaaat
ttggcagaatctggtgagattgtggatcaagatgggtcagtttccgaggaaaagactgac
gatggtctggaagttgaacgttctgacactgatttggaagagcaactggaatctgagcac
atcattgataaggtgatcgaagagaggttggagatcagcaggttggctgaaaaaaatgca
gagaaaaggccgaaggtaccgatgaaaccattggagcgggctgaggagcttgagaagaga
caggcctcatttgggcagcactgggaggagggagcagcagcgcaacccatgcacctggag
gggattgggaaggggcaaccagctattggttacatgcagattgatgtggacaacccaata
acccgtgccatggcatctccctcttttagacaggaccatggctctcctcaggtcttagca
gtacataggagctatattgccatgggcatgtccactggatctgttatcatcgtcccaagc
aaatactccatccatcaagctgatgatacagatgcaaagatgctgttcttttggaaccaa
ggtgagaaaacccaatcaccagtgactgccatgtgctttaacctgcaaggggatcttctg
ctagtaggatatggtgatggtcatatgacaatttgggatgtacagaaagctactgcagca
aaggtcatatatggtgagcatacaggagctgtagtgcatgtttgttttatccgccaatct
aaagtcatcactggtgattcaaaagggcttgttcttctgcacacattctctattatcccc
gtcattaatcgcttgactgttaagggaactcagcgcctttttgatggaaacactggaatc
gtgctctcagcctgtcctcttctagcggatgaatcctttggttctggcaactcatctacg
cagggcaacctaccaacttcctccagtggtggtcttgggagcatgatgggaggtgtagtt
ggagtagattctggatggaagtttttcaatgaaggttcttctccattggaggatggtgtt
acagtcatgttcattatgcatcaacatgctcttgtggttagactccgtaccaacattgac
catgttgaccatattgagaacttttctagaccagaaggagcacgcgaagggtcaattgct
tatgctgcatggaaatacacatcgtcctccactgattcatcgccaattgatgaagagcga
gtatcttggcttgcgcttgcatgggaccgtcaagtacaagttgcaaaacttgttaaatcg
aagatgatcagacataaggactggaagcttgatagtgccgctgttggcattgcctggtta
aatgatcagatgttagctgtccttaacttgaaagggcagctctgtttgttctcaaaagat
ggcagtgagcttcgcaggactatctttattcttgatggttttgtcttcgatgacagcata
ctgtaccatacacatttttctaacaggtttggcaaccctgagaggcattttaacaactca
gtagcagtgagaggtgctacagtatatattcttggcccaagctttcttacagtttcgcga
cttcttccatggaaagagcggattgaagcactaaagatggctggtgattggatgggtgca
ctggacatggcaatgaagctttatgacggtcacacacagggtgttgttgatcttccgaga
acagttgattccataaggggagccataatgccttatttagtagagttgctgctgtcatat
ataggttatgtctttgaatatatttcaattgcattgtcaaatcatactggaaagggggga
gcaatagatggcttgatagatgccgatagatccctgctgacacagagagaagaacaatat
gctcgtgtaggaggggtcgcagtcgagttctgtgttcacattgggcggaatgacatcctg
tttgatacagtcttctctaagtttgttgctgcccaaagtggaggtatatttctggaggta
ctagagccatatatattgaaagatatgctgggttctttaccccctgagatcatgcaagct
ctagtagagcattatagtggcaaaggatggttgcagcgagtcgagcaatgcattcttcat
atggatatttcatcactggattttaatcaggtagtcagactgtgtcgtgagcatgggtta
tatggtgctctaatttatttatttaaccaagggttgaatgatttccgtacacctctagag
gaacttctatctgtcatccagaatgctactcgaaaagatgctacttctacttgctacaga
atgcttgtttatctgaagtattgcttccagggcctagcatttcctccagggcatggaaca
attccccgagcccagcttcatgcagtgagaaaagaacttctgcaattcatgctcgaggac
tctaaaatgctcacttctgaagtattcaagggttttagttcttcttctggaaaatgccca
aacatatgctatctattatggatggatacggaagctactttggaagttgtcaagtgtgct
tttgcacaagagaattttgaacctacttctagtactcttgatgcatctgtatctaaggat
gaagaagatactgatattgaaagcccagatagtcaaaatattttgttacaaagtgtagtt
gacgccatcattcatattgttggtttagaaaatgaggcaatccattccgttgttgtgggt
actgctgagtcagaagaatcggaactttggccttcagtgagtgacttcggtcatatcgtt
gaattcgtgtccttttttgtttcctataaaagggcaaatgcatctcaaagagttctcaag
cacattcttaaatacctcacgtcatccactacatcatatgatgataaaaagatgccacct
cagaaagaagttcttcagctcttcaacgtggttcctcaaactgactggaattctgattat
gtgttgaatctttgtttagatgcccattttcatcaggcctgtggcatgatatatacagcc
agaaatcaaaatttggctgctttagatagttacatgaaggatacaatggaaccataccac
gcatttatcttcatcaacaaaaagttacttcaattggcaagtgatgaagctttgtcgttt
cgttccacagtaatatctcgttttgctgagctagtcaatctaagcagggagtgtgcattt
gtcttggtcattgatcattttcacgatgagatccagcaaatattggcagagcttcattct
gatcactgcagcctctttcttttcttgaaaactgcaatcgaagtacacttgtcaggaaaa
cttgacttcagtgaacttactgccagaaactatgaaattgttgaaagtctgtactctggc
gatctcgaagattatcttcagagattatcaaatctcccaaagttgtttgaccgcaatcct
atttctatgactgataagttagttgaactctatctggagcttctgtgtcagtatgaacca
aggtcagttctgaagtttctggagactttcgatagctacagattggagaggtgtttgctc
ctttgtctagattatggagttacagatgctgctgcatttctgcaagagagggttggtgat
gttgcgagcgcgttggaacttgttctagctggactagatgagaaagttaaccagtttatc
gcttcggtggaaaatgcgttctctcggacatcgtcaaagagtatctctgaaattgagcaa
ccagacattgttctaaacatgagcgaggctcgtcctgtgcttgatgtgttacgttcctcc
attggattgtgccaaaggaattcacagcgtttagatccagaggagtctcagttactttgg
tttcaactggttgacaatttctcagatccactgaaaaagttgtatggaagcaaggttgta
aatggaaaaggttgttggtccgtgggtggtgaaacaacaaatggacatccaacaggcaaa
ggattctcacaaaaaatggtgaattcagcttatcaaaggtgtttgaatactttgcggaga
gttttctcacaatttgttggagagataattgaggcaatggctgggtatatacccctgcca
gcaattatggcaaagctattatctgacaatggaagtcaagagtttggtgattttaaactt
gtcatacatagaatgctgtctatgtatctctacgaaaaaagaatactggaaacagctaag
tcagttatcgaggatgattcgttctataccttgagcttactaaagagaggggtttgtcat
ggatttgctccacagacttttgtctgttgtgtatgcaactgctcactttctaaagaaggt
gctatttcagcagttcgagtattcagttgtggacatgcaacacatcttcactgtgagtct
gaacaaagcaaatcatccaataaggattttaaagatggatgtccagtttgtctctcaatg
agtgacacacaagcccggaacaaatcgcctatattagctgagaatgggctacccaagtat
cccgtggttgaacatgaagtaccatatggcgtccatcataatcacgagacagatcatgtt
gagagatctcgtgggcttcaccagatgtcacggtttgaaatactgaacaatctccagaaa
ggtcagaagtcttttcatattgagactgtacccccattgaaactttctccgccagccata
tatcatgaaaagatacaaaagagagtaagtttggtgggagaatccagcagacattcagtt
agaagtggaaaaccacagaaaatatggcacatgaaggagccaaaatcaaagaaatcaggg
aattggcttccaccaaagtcaagcatattcagttctgacaagaatcaagtgcagtag
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integrated database retrieval system