Aegilops tauschii (wheat D): 109735678
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Entry
109735678 CDS
T04345
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109735678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109735678
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
109735678
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
109735678
NCBI-ProteinID:
XP_020150476
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Position
1:452465286..452470026
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AA seq
203 aa
AA seq
DB search
MVGAPSSPVVNVYPLANYTFGTKEAKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQ
EHNHPHILLLQIGNTFCKLPGGRLKPGESEIEGLKRKLCSKLAVNSPSFPPNWQVGECVA
EWWRPNFETVMYPYCPPHITKPKECKKLFIVHLTEREYFAVPRNLKLLAVPLFELYDNVQ
RYGPVISTIPQQLSRFQFNMVSS
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcgctccgtcctcgccggtggtgaacgtgtacccgctcgccaactacacgttc
ggcaccaaggaggccaagatggagaaggacacctccgtcgccgaccgccttgctcgcatg
aaagtcaactacatgaaagaaggaatgcgaacaagtgttgaagcaatcctattggtgcaa
gagcacaaccacccccacatactgttgttgcaaattggaaacacattttgcaaacttcct
ggtggacggttgaagcctggagaaagtgaaattgagggcctgaaaaggaagctgtgcagc
aagcttgcagttaactcaccttcctttccacctaactggcaggttggtgagtgtgttgct
gaatggtggaggccaaactttgaaaccgtgatgtatccttactgccctccacatataaca
aagcccaaggagtgcaagaagcttttcattgttcacctaactgaaagggagtatttcgct
gttccaaggaacttgaagctacttgctgttccactgtttgaactatatgacaatgttcag
cggtatgggccagtgatttccaccatcccgcagcagctgtccaggttccagttcaacatg
gtgagctcgtaa
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