KEGG   Aegilops tauschii (wheat D): 109736225
Entry
109736225         CDS       T04345                                 
Name
(RefSeq) histone-binding protein MSI1
  KO
K10752  histone-binding protein RBBP4
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03082  ATP-dependent chromatin remodeling
ats03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109736225
   03083 Polycomb repressive complex
    109736225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ats03036]
    109736225
Chromosome and associated proteins [BR:ats03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     109736225
  Histone modification proteins
   HAT complexes
    HATB complex
     109736225
   HDAC complexes
    Sin3A-HDAC complex
     109736225
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     109736225
    PRC2.2
     109736225
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     109736225
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    109736225
  Chromatin remodeling factors
   NuRD complex
    109736225
   NuRF complex
    109736225
   NuRF complex (fruit fly)
    109736225
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 CAF1C_H4-bd WD40 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_WDR3_2nd WD40_RFWD3 Beta-prop_Aladin Beta-prop_EML EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st ANAPC4_WD40 WD_LRWD1 WD40_MABP1-WDR62_2nd eIF2A Beta-prop_RIG_1st Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_HPS5 MIOS_WD40 RMC1_N WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 109736225
NCBI-ProteinID: XP_020151053
LinkDB
Position
5:469111682..469119293
AA seq 428 aa
MPKAGGGDEEEFRAEVEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLPDRTEP
AGKDHSVQKMVLGTHTSDNEPNYLMLAQVQLPLDDAEADARHYDDDHADIGGFGAASGKV
QIVQQINHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLKG
HNSEGYGLSWSIFKEGHLLSGSDDAQICLWDITANGKNKTLDAYQIFKFHDGVVEDVAWH
LRHEYLFGSVGDDHHLLIWDMRSPAPTKPVQSVVAHQGEVNCLAFNPFNEWVVATGSTDK
TVKLFDLRKIDTSLHTFDCHKEEVFQVGWSPKNETILASCCLGRRLMVWDLSRIDQEQTP
EDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVLASVAEDNILQIWQMAENIYHDEDDLP
SDEPAKAS
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgccgaaggccggcggcggggacgaggaggagttccgcgccgaggtggaggagcggctg
atcaacgaggagtacaagatctggaagaagaacacgcccttcctctacgacctcgtcatc
acccacgcgctcgaatggccctcgctcaccgtgcagtggctccccgaccgcaccgagccc
gccggcaaggaccactccgtgcagaagatggtgctcggcacccacacctccgacaacgag
cccaactacctcatgctcgcccaggtccagctccccctcgacgacgccgaggccgacgcg
cgccactacgacgacgaccacgccgacatcggcggcttcggggccgcatccggcaaggtg
caaatagttcaacagataaatcatgatggagaagttaatcgggctcgatatatgccccaa
aattcatttattattgctaccaagacagtcagtgcagaagtgtatgtctttgattatagc
aagcacccatcaaagcctccactagatggtgcgtgcaatcctgatttacggctgaaggga
cacaactctgaaggatatggcctgtcctggagtatctttaaagagggtcatttgctgagt
ggatcggatgatgctcaaatttgcttatgggacatcacagcaaatggtaaaaataaaact
ctcgacgcataccagatttttaagtttcatgatggcgtcgttgaagatgttgcttggcat
ttgaggcatgaatacttattcggctcagttggtgatgatcatcatctcctaatttgggat
atgcgtagtcctgcacctaccaagcctgtacagtctgtggtggcacaccagggtgaggtg
aattgcctggctttcaatcctttcaatgaatgggttgttgcaactggttcaaccgacaag
actgtcaaattatttgatcttcggaagattgatacttcgctgcacacttttgattgtcac
aaagaggaagtatttcaagttggatggagcccaaagaatgaaactatacttgcatcttgt
tgtctgggaaggaggctgatggtttgggatctaagcagaattgatcaggagcaaacacca
gaggacgcggaggacggccctcctgagctcttgttcattcatggaggccacacaagcaaa
atctcagacttctcctggaacccgtgtgaggactgggtgcttgcaagcgttgctgaagac
aacatccttcagatatggcagatggcggagaacatctaccatgacgaggatgatcttccc
agcgatgagccggcaaaggcttcatga

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