Aegilops tauschii (wheat D): 109736281
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Entry
109736281 CDS
T04345
Name
(RefSeq) probable CCR4-associated factor 1 homolog 9
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109736281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109736281
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109736281
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109736281
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
109736281
NCBI-ProteinID:
XP_020151093
LinkDB
All DBs
Position
7:429981477..429982263
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AA seq
244 aa
AA seq
DB search
MDDGAAAVRSVWADNFKAESAVFCQIAPHATHVALNVQYPGCVIRGDGRKSHYDMTAEER
YQVIHANVSLLKPLQVGLAIRTDDGGRFAWEFNLRGFDVASDLDARDPDSIAYLARRGVD
LASRVRAQASWATFAGAYHVGYFAAMMSGEKLPDDVDDFMEMVRQLLGPAVYDVKRLARQ
HDQRCVGALGHIVKQLGVVQPNEPKPTPAGTGSTLALLAFETLKEKLGANAEKYRGQLCG
LQAV
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggacgacggcgccgccgccgtccggtcggtgtgggccgacaacttcaaggcagagtct
gccgtcttctgccagatcgcgccgcacgccacgcacgtcgcgctgaacgtgcagtacccg
ggctgcgtgatccgcggcgacggccggaagagccactatgacatgaccgccgaggagcgg
taccaggtgatccatgcgaacgtgtccctcctgaagccgctccaggtggggctcgccatc
cgcaccgacgacggcggccggttcgcgtgggagttcaacctgcgcgggttcgacgtcgcc
tcggacctcgacgcgagggaccctgactccatcgcctacctcgcccgccgcggggtcgac
ttggcttcccgagtccgggcccaggcgtcgtgggcgacgttcgccggcgcgtaccacgtc
ggctacttcgcggccatgatgtccggcgagaagcttccggacgacgtggacgatttcatg
gagatggtgcggcagctcctcgggccggccgtgtacgacgtgaagcggctggcgaggcag
cacgaccagaggtgcgtcggcgcgctgggccacatcgtgaagcagctcggcgtggtgcag
cccaatgagccgaagccgacgcccgccggcacaggtagcacgctggcgctcctggctttc
gagacgttgaaggagaagcttggcgccaacgcggagaagtaccgcggccaattgtgtggg
ctccaggctgtttaa
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