KEGG   Aegilops tauschii (wheat D): 109736338
Entry
109736338         CDS       T04345                                 
Name
(RefSeq) histone-binding protein MSI1
  KO
K10752  histone-binding protein RBBP4
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03082  ATP-dependent chromatin remodeling
ats03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109736338
   03083 Polycomb repressive complex
    109736338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ats03036]
    109736338
Chromosome and associated proteins [BR:ats03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     109736338
  Histone modification proteins
   HAT complexes
    HATB complex
     109736338
   HDAC complexes
    Sin3A-HDAC complex
     109736338
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     109736338
    PRC2.2
     109736338
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     109736338
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    109736338
  Chromatin remodeling factors
   NuRD complex
    109736338
   NuRF complex
    109736338
   NuRF complex (fruit fly)
    109736338
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 Beta-prop_EIPR1 CAF1C_H4-bd WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WDR55 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 WD_LRWD1 WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_HPS5 MIOS_WD40 Beta-prop_DCAF4 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 109736338
NCBI-ProteinID: XP_020151149
LinkDB
Position
5:440751266..440756658
AA seq 404 aa
MDGGSSFQAFTAAAAMEMEEYLNWKKNAPVLYDLVVSHPLEWPSLTVQWLPSGSSASARS
HRLVLGTHASDDSPNHLMLVDAVLPLPPRLAAAAAAEGRAVPAPSVSIGRSASHQGEVNR
ARCMPQRPYTVATKTCVDEVHVYHLGEDGDKGGADAVLRGHGAEGYGLAWSAMKEGFLLS
GSYDKKICLWDLKAGNGAPVLDAQQVFEAHEDVVEDVAWHLKDENLFGSVGDDCKFMMWD
LRTNKPEQSMVAHQKEVNSLSFNPFNEWILATASGDGTIKLFDLRKLSRSLHAFDNHEGE
VFQVEWNPNLETVLASHAADKRVMIWDVSRIGEEQADEDAGDGPPELLFVHGGHTAKISE
LSWNPSEKWVVASVAEDNVLQIWEVAESIYSDDNGSNSNAQPLP
NT seq 1215 nt   +upstreamnt  +downstreamnt
atggacggcggctcctccttccaggccttcacggccgccgccgccatggagatggaggag
tacctcaactggaagaagaacgcgccggtgctctatgacctcgtcgtgtcccacccgctc
gagtggccctcgctcaccgtccagtggctcccctcggggtcgtcggcctccgcccgctcc
caccgcctcgtcctcggcacccacgcctccgacgactcccccaaccacctcatgctcgtc
gacgccgtgctcccgctcccgccgcgcctggccgcggcggccgccgccgagggccgcgcc
gtcccggccccgtccgtgtccatcggccgctcggcgtcgcatcagggcgaggtcaaccgc
gcccggtgcatgccgcagcggccgtacaccgtggccaccaagacctgcgtcgatgaggtg
cacgtgtaccacctcggggaggacggcgacaagggcggcgcggatgccgtgctcaggggc
catggcgcggaggggtatgggctggcgtggagcgccatgaaggaggggttcctcctgagc
ggctcgtatgataagaagatttgcctgtgggatctcaaggccgggaatggagccccggtt
ctggacgcgcaacaggtgtttgaggctcatgaggatgtcgttgaagatgttgcttggcac
cttaaggatgaaaacctatttggatctgttggcgatgactgcaagttcatgatgtgggac
ctacgtacgaacaaaccagaacaatctatggttgcgcaccaaaaggaagtgaactctctg
tccttcaatccgtttaatgaatggatcttggctacagcatctggcgatggaactattaag
ctatttgacttgcgaaagctatctagaagcttgcatgctttcgacaaccatgagggcgag
gttttccaggttgagtggaatccaaacttggagactgtattagcctcccatgctgcagac
aaaagggtgatgatatgggacgttagcaggatcggcgaggagcaggcggacgaggacgcg
ggcgacgggccaccggagctgcttttcgtccacggcgggcacacggccaagatctcggag
ctgtcgtggaaccccagcgagaagtgggtggtggccagcgtggcggaggacaacgtgctg
cagatctgggaggtggcagagagcatatacagcgacgacaacggcagcaacagcaacgcc
caacctcttccctga

DBGET integrated database retrieval system