Aegilops tauschii (wheat D): 109736338
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Entry
109736338 CDS
T04345
Name
(RefSeq) histone-binding protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03082
ATP-dependent chromatin remodeling
ats03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109736338
03083 Polycomb repressive complex
109736338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ats03036
]
109736338
Chromosome and associated proteins [BR:
ats03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
109736338
Histone modification proteins
HAT complexes
HATB complex
109736338
HDAC complexes
Sin3A-HDAC complex
109736338
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
109736338
PRC2.2
109736338
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
109736338
Heterochromatin formation proteins
Other heterochromatin formation proteins
109736338
Chromatin remodeling factors
NuRD complex
109736338
NuRF complex
109736338
NuRF complex (fruit fly)
109736338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_EIPR1
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_HPS5
MIOS_WD40
Beta-prop_DCAF4
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
109736338
NCBI-ProteinID:
XP_020151149
LinkDB
All DBs
Position
5:440751266..440756658
Genome browser
AA seq
404 aa
AA seq
DB search
MDGGSSFQAFTAAAAMEMEEYLNWKKNAPVLYDLVVSHPLEWPSLTVQWLPSGSSASARS
HRLVLGTHASDDSPNHLMLVDAVLPLPPRLAAAAAAEGRAVPAPSVSIGRSASHQGEVNR
ARCMPQRPYTVATKTCVDEVHVYHLGEDGDKGGADAVLRGHGAEGYGLAWSAMKEGFLLS
GSYDKKICLWDLKAGNGAPVLDAQQVFEAHEDVVEDVAWHLKDENLFGSVGDDCKFMMWD
LRTNKPEQSMVAHQKEVNSLSFNPFNEWILATASGDGTIKLFDLRKLSRSLHAFDNHEGE
VFQVEWNPNLETVLASHAADKRVMIWDVSRIGEEQADEDAGDGPPELLFVHGGHTAKISE
LSWNPSEKWVVASVAEDNVLQIWEVAESIYSDDNGSNSNAQPLP
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggacggcggctcctccttccaggccttcacggccgccgccgccatggagatggaggag
tacctcaactggaagaagaacgcgccggtgctctatgacctcgtcgtgtcccacccgctc
gagtggccctcgctcaccgtccagtggctcccctcggggtcgtcggcctccgcccgctcc
caccgcctcgtcctcggcacccacgcctccgacgactcccccaaccacctcatgctcgtc
gacgccgtgctcccgctcccgccgcgcctggccgcggcggccgccgccgagggccgcgcc
gtcccggccccgtccgtgtccatcggccgctcggcgtcgcatcagggcgaggtcaaccgc
gcccggtgcatgccgcagcggccgtacaccgtggccaccaagacctgcgtcgatgaggtg
cacgtgtaccacctcggggaggacggcgacaagggcggcgcggatgccgtgctcaggggc
catggcgcggaggggtatgggctggcgtggagcgccatgaaggaggggttcctcctgagc
ggctcgtatgataagaagatttgcctgtgggatctcaaggccgggaatggagccccggtt
ctggacgcgcaacaggtgtttgaggctcatgaggatgtcgttgaagatgttgcttggcac
cttaaggatgaaaacctatttggatctgttggcgatgactgcaagttcatgatgtgggac
ctacgtacgaacaaaccagaacaatctatggttgcgcaccaaaaggaagtgaactctctg
tccttcaatccgtttaatgaatggatcttggctacagcatctggcgatggaactattaag
ctatttgacttgcgaaagctatctagaagcttgcatgctttcgacaaccatgagggcgag
gttttccaggttgagtggaatccaaacttggagactgtattagcctcccatgctgcagac
aaaagggtgatgatatgggacgttagcaggatcggcgaggagcaggcggacgaggacgcg
ggcgacgggccaccggagctgcttttcgtccacggcgggcacacggccaagatctcggag
ctgtcgtggaaccccagcgagaagtgggtggtggccagcgtggcggaggacaacgtgctg
cagatctgggaggtggcagagagcatatacagcgacgacaacggcagcaacagcaacgcc
caacctcttccctga
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integrated database retrieval system