Aegilops tauschii (wheat D): 109736754
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Entry
109736754 CDS
T04345
Name
(RefSeq) probable tRNA-splicing endonuclease subunit Sen2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ats03016
]
109736754
Enzymes [BR:
ats01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
109736754
Transfer RNA biogenesis [BR:
ats03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
109736754
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
DNA_processg_A
Motif
Other DBs
NCBI-GeneID:
109736754
NCBI-ProteinID:
XP_020151551
UniProt:
A0A453TB86
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Position
7:complement(640650594..640652436)
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AA seq
289 aa
AA seq
DB search
MDKAGPRWKKGKDGKDFAALAAAHPMSSIVAELQSSLKGSKLVATLSNQGRDATLGVNLQ
QATLLNRAAFGRALDNAEAGKQWFQLGAEEVFYLYHGLKCISVSESKKLLSEGELWDHLC
SASESFPEMYKAYSHLRSKNWVVRSGLQYGADFVAYRHHPALVHSEFAVVVVPEGVEFGG
RCGRLKVWSDLLCALRASGSVAKTLLVLTVSSSICELSSPDCLEQLVVHERTITRWIAQQ
CREQRCEPSREEPNNEEQDHTRETVVFNYWGVILGFTVLSSLLVYKLRF
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggcgggtccaagatggaagaagggcaaagacggcaaggactttgcagctctg
gcagcagctcaccccatgtcaagcattgttgctgagctccagtcctcgctgaaaggctcg
aaacttgtggcaactttatctaatcagggcagggatgcgaccctcggtgtgaatctgcag
caagctacactacttaaccgtgctgcctttggccgggcgctggataatgccgaagcaggg
aaacagtggttccagctgggggctgaggaggtcttctatctttaccatggtttgaagtgc
atctcagtgtcagagagcaagaagctgttgagtgaaggggagctgtgggatcacttatgc
tctgcatcagagtcatttcccgagatgtacaaggcatactcgcatctcagatcgaagaac
tgggtggtgcggtcaggtttgcagtatggcgcagattttgtagcttaccgtcatcatcca
gcgctcgtccactcagagtttgctgtggttgtagttccagaaggagtggagttcggcggt
aggtgtggccgcctcaaggtgtggtctgaccttctgtgcgcactccgagcctctggcagt
gtggccaagacattgctggttctgacagtctccagcagtatttgtgaactgagctcccca
gactgtttagaacaactggttgttcatgagagaacaattactaggtggatagcccagcag
tgccgtgagcagcgatgtgaaccgtccagagaagaaccaaataacgaagaacaggatcac
acaagagaaacagtagttttcaattattggggtgtaatactaggcttcacagttctttct
agcttacttgtatacaagctgagattctga
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