Aegilops tauschii (wheat D): 109736943
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Entry
109736943 CDS
T04345
Name
(RefSeq) probable cytosolic oligopeptidase A
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03018
RNA degradation
ats03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109736943
09123 Folding, sorting and degradation
03018 RNA degradation
109736943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109736943
03041 Spliceosome [BR:
ats03041
]
109736943
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109736943
mRNA degradation factors
5'-3' decay
Lsm complex
109736943
Spliceosome [BR:
ats03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109736943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP_N
LSM
Hfq
SM-ATX
Motif
Other DBs
NCBI-GeneID:
109736943
NCBI-ProteinID:
XP_020151747
LinkDB
All DBs
Position
1D:complement(466659713..466661643)
Genome browser
AA seq
113 aa
AA seq
DB search
MAGRKETALNLAKFVDKGVQVKLTSGRQVTGTLKGYDLLLNLVLDQAVESEREGELEELE
KGVEPAWERLVHPLERIVDRLNAVDHIKVVKDSPDLCAAVEDVQVVSLLSRRL
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcgcaaggagacggcgctcaacctggccaagttcgtcgataagggcgtccag
gtcaagctcaccagcggccgccaagttacaggaactttaaagggatatgacctactgctg
aacttagtgctggatcaagcagtcgagtctgaaagagagggcgagctggaggagcttgag
aagggtgtggagcctgcgtgggagcgcttggtccacccgctcgagcgcatcgtcgacagg
ctaaacgccgttgaccacatcaaggttgtcaaggactcacctgacctctgtgccgccgtc
gaggatgtccaggtagtctctcttctgtcacgccgcctgtga
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