Aegilops tauschii (wheat D): 109737439
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Entry
109737439 CDS
T04345
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109737439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ats03400
]
109737439
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
109737439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_19
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
109737439
NCBI-ProteinID:
XP_020152162
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All DBs
Position
3:316216153..316220801
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AA seq
1270 aa
AA seq
DB search
MPTTPSPGDLPGRRPRRLIIDDVDDDDGHRAPEVAAAGSQRVEAESAQDLVPNPLAPLSS
SQPAAAPATGAKPAEIIEIDDDDRVPEVATVGSQRVEAESAGDLLRNPLAPSSSSQRADA
LGTGVQPAEIIEISDDDGEEEDVGETGGPVKKEPVDDIDWPSLLLSSEEEKEAPRSDEST
SSGGPDGTSNGIETSRREGASDDGEEEREEEVGMPDPEDKDGAEDGHEEEDKEEEEEDKE
EDEWEQEEEEESEESEEDSEEPEAEEEPGRRVLSDARLAGRYTGPWPGGEIFPKRKFEGW
YITKMADTGSPGGTVASRLRSKRRCPDAKLLRQATRRKPYCVDTPSQSSSDAEEDEKDKP
PPHPARSSSDEGGRGHGRTGIRRPRRRGQNADDDSDEDGRTATRRRRGQNAAHSDEDFEE
PGGMAAARRREKQRMEEDDDAADGGDEADEQGASWRAKKEGAASCRQAAGRKCKDFPAEG
WEQQGDVTFKKSSLVPPRRQDGRDQETYDDLLYSIFEGIETTLQNASLPLDAPVPAPEQG
GDPFPLVFSFGVVDEVVPEKTALDDLWAQRDLALDLEAESNKVSSHTCHKDEESDEHEIP
AHGGTFCKRGKHDLFHDDQIGIRCRKCDYIEIEIRHVFPSMAKESTDREPAAEHDRLDMF
VDDILKSVGYEGASNVGLASDKTGVVWDLIPGVREDMFPHQREGFEFMWRKLAGGIDIEQ
LRHTMNTDTTSGCVISHAPGTGKTRLAITFVQSYLELFPHCRPVIIAPRGMLATWEQEFS
KWNVKLPFHVLSSSEIQWNQDKTIHKLVSKDHGLGQKLAMKKLSQKSKMMLKLASWYEGS
SIIGLSYSLYRNLAKGEGKDGEMQRNLLLEKPGLLVLDEGHTPRNKKSLIWKVLAEVSTE
KRIILSGTPFQNNFLELYNILCLVKPKFAKDFACTRLSKKGVASTSQSRAAPQVEEDEGK
EFWSSLRISNITDEHITEIREKLGPFVHIHNGDILQKSLPGLRESVVILNPLPRQKEIIA
MMEESAGKGFLDAEYKISLASIHPFLVTSTKLSDTEASVVDKMKSVRLNPCEGVKTWFVF
EIIRLCEALKERVLVFSQYLEPLALIMDQLTTELDWTEGKEILLMSGNVRVKQREALMEA
FNDMNSEAKVMLASTKACCEGITLVGASRVVLLDVVWNPSVGRQAIGRAYRIGQEKIVYT
YNLIAEGTKEKVKYDRQATKDHMSKLLFSNEPQPTGSNLSPELISNDRILEKMAAREELK
DMFVQILPSH
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccacgccgtcgcccggcgacctccccggccgcaggccccgccgcctgatcatc
gacgacgtcgacgacgacgacggccaccgcgcgccggaggtcgccgcggccgggagccag
cgcgtcgaggcggaaagcgcccaggatttggtgccaaacccgctcgcgcccttgtcctct
tcgcagccggcggctgcaccggctaccggcgccaagcccgccgagatcatcgagatcgac
gacgacgaccgcgtgccggaggtcgccacggtcgggagccagcgcgtcgaggcggaaagc
gccggggatttgttgcgaaacccgctcgcgccctcgtcctcttcgcagcgggcggatgca
ctgggcaccggcgtccagcccgccgagatcatcgagatctccgacgacgacggagaagaa
gaagatgtcggcgagaccgggggaccagtcaagaaggagcctgtcgatgacatcgactgg
ccctctctcctcttgtcaagcgaggaggagaaggaggccccgaggtctgacgagagtacg
agcagcggcggccccgatggaacgagcaacggaattgagacgagtcgacgagagggtgcc
tctgacgatggcgaggaggagcgggaggaggaagtggggatgccggatccagaggataag
gacggtgcagaggacgggcatgaggaagaagataaagaggaggaagaggaagataaagag
gaagatgaatgggagcaggaagaagaggaggagtcggaggaatcggaagaagattccgag
gaacctgaggcagaggaagaaccgggccgtcgcgtgcttagcgatgccaggctcgccggt
cggtacacggggccgtggccgggcggcgagatcttccccaagcggaagtttgaagggtgg
tacatcaccaagatggcggacaccggctctcctggcggcaccgtcgcgtcgcggctgcgg
tcaaagcggagatgccccgacgcgaagctgctccggcaagccacccgcagaaagccgtac
tgcgtcgacacgccgtcgcagtccagctcggatgcagaggaggacgagaaagacaaacca
ccgcctcatccagcgcggtcgtccagtgacgagggcggccgcgggcatggcaggacgggg
ataaggcgcccacggcgcagaggacaaaacgccgatgatgactctgacgaagatggcaga
acggcgacgaggcggcgccgaggacaaaacgctgcccacagcgatgaagacttcgaggaa
cccggcggaatggccgccgcgaggagaagggagaagcagcgcatggaagaagatgatgat
gctgctgacggcggcgatgaggctgatgagcagggagcttcctggagggcaaagaaagaa
ggagcggcgtcctgccggcaggcggccggccgcaagtgcaaggacttccccgcagaggga
tgggagcagcagggcgatgtcaccttcaagaagagctcgctggttcctccgaggcggcag
gacgggcgagaccaagagacttacgacgatctgctctactccattttcgagggaatcgag
accactcttcagaacgcctctcttcctctggacgcccctgttcctgcaccagagcaggga
ggcgatccgtttcctctggtgttctccttcggggttgtagatgaggtggtgccggagaag
actgctctggacgacctgtgggcacaacgtgacttggccttggacttggaggccgaatcc
aacaaggtttcttctcacacttgccacaaggacgaggagagcgatgagcatgaaattcct
gcacatggagggactttttgcaagcgagggaagcatgatctctttcatgatgatcaaatc
ggcattcgatgccgaaaatgcgattacatcgaaatcgaaattagacacgtatttccatcc
atggccaaggaatcgacggatagggagccagcagcggagcatgataggcttgacatgttc
gttgatgacatcctgaaatcagttggatatgaaggggcaagcaacgtggggttggcaagt
gacaaaactggcgtcgtctgggatctcattcctggggtacgggaagacatgttcccacac
cagcgggaagggtttgagttcatgtggagaaaacttgcaggagggatcgacattgagcag
ctgaggcacaccatgaacactgacaccacaagtggctgtgtgatctctcatgccccgggg
accggcaagaccaggctagcaatcacattcgtgcaatcttacctggagctcttcccgcac
tgcaggccagttatcattgcccccaggggtatgctggctacatgggagcaggagttcagt
aaatggaatgtcaagctcccgttccatgtcctcagttccagtgagatccagtggaatcaa
gacaagaccatccataaactggtctccaaggatcatggtctgggccagaagctggccatg
aagaaactgagccagaaatccaagatgatgctgaagctggcatcatggtatgaagggagc
agcatcatcggtctaagctattcgctctacaggaatcttgccaagggcgaaggcaaggat
ggagaaatgcagaggaacctgcttcttgagaagcccggcttgctggtcctcgacgagggg
cacacaccaaggaacaagaagagcctcatttggaaagttctcgcagaggtcagcaccgaa
aagcggataatcctgtcagggactccattccagaacaacttcctagagctgtacaacatc
ttgtgcctggttaagcccaagtttgccaaagattttgcttgtacaagactcagcaagaaa
ggagttgcttccaccagtcaatcaagagcagcgcctcaggtggaggaggatgaaggcaaa
gaattctggagttcattaaggataagtaacatcacggatgaacacatcactgaaatccgg
gaaaagctgggcccttttgtgcacatccataatggtgacattcttcagaagtctcttcca
ggattgagagaatctgttgtgatcctaaaccctcttcctcgtcagaaggaaatcatcgca
atgatggaggaaagtgcagggaagggttttcttgacgcagaatacaagatatctcttgcg
tccatacacccattcctcgtcacaagcacaaagctgtcagacacagaagcctctgttgtg
gacaagatgaagagcgtgcggctgaacccatgcgaaggagtgaagacatggttcgttttt
gagatcatccgtctttgcgaagcactgaaagaaagagtgctggtgttcagtcaatacctt
gagccactggccctgatcatggaccagcttaccacagagctagactggacagaaggcaag
gagatcctactcatgagtggaaatgtgcgtgttaaacagcgcgaagccttgatggaagcc
ttcaatgacatgaacagtgaggctaaggtgatgcttgcatcaaccaaggcctgctgtgaa
ggaataacactggtcggtgcatcgcgtgtggttctccttgatgtcgtctggaatccttct
gttggacggcaggcgattggccgagcctatagaatcggccaggagaagattgtgtacaca
tacaacctgattgcagaaggaacaaaggagaaggtcaaatatgacagacaagctaccaag
gatcacatgtccaaattactgttttcaaatgaaccgcaacctaccgggagcaatctgtca
ccagaactgatatccaatgataggattttagaaaaaatggctgcacgtgaagaacttaaa
gacatgtttgtgcagattctcccttcccattga
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