Aegilops tauschii (wheat D): 109738543
Help
Entry
109738543 CDS
T04345
Name
(RefSeq) protein ALTERED SEED GERMINATION 2
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ats04121
]
109738543
Ubiquitin system [BR:
ats04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109738543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
PROPPIN
TPR_2
Beta-prop_DCAF12
TPR_14
Pex26
TPR_16
TPR_19
Beta-prop_VPS8
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
109738543
NCBI-ProteinID:
XP_020153232
LinkDB
All DBs
Position
4D:475474855..475483405
Genome browser
AA seq
752 aa
AA seq
DB search
MEMDAAERLRWRFSDGGLTDLLDARSLHGSPDIGKRMQFHSSLVQRLALEKEIEGHVGCV
NAIAWNSSGSLLISGSDDTRVNIWNYANQELLHEIDTGHSANVFCTKFVPETCDEVVVSG
AGDAEVRVFNLSRLSGIRPREIAMEPAAVYQCHSRRVKKLAVEGGNPNVVWSASEDGTIR
QHDFRECSSCPRAGLVNQECRNVLLDLRSGGKKSLADPPRQPMSFKSCDISSVRPHQLLV
GGSDAFARLYDRRMLPPLSSCQTRRKPPPCIKMFCPLHLAENRKSSLHLTHVAFSPNGNE
VLLSYSGEHVYLFDVDPDNTSPVRYTADDVRDQLCLLPFHKEPRKQKSKRDKFPAKRNLC
RVDMLKKLTQVVIKSLETGTNLMHGIEACCEILEAMESDIDDSTRHDCLCTRAGLYLKRR
WKNDVYMAIRDCNEARSIDFASFQAHLFMADALLQIGRLKEAREYAEAAHSLVPPNSVSA
EQVENIKKRLAAAELEKNKKDQQGNTNTDARHGRLRSLSDLLFRSDVSGSSSQEGREDSD
YDDEMELDFDTSVSGDESRDSDPGAVRGSLRLKLHRREDQPNEQSVGNGSAESTCNGDSA
YEPDVAIDMKKRYVGHCNVGTDIKQASFLGEQGEFIASGSDDGRWFIWEKRTGRLVKMLA
GDGAVVNCIQSHPYDCAVATSGIDNTIKLWTPDAEGTSMVDGPEIDVLSAIENNQKKLCR
NRETLLPFEFLERFGAHEFAEGSLHPLECAQT
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggagatggacgcggcggagaggctgcggtggcgcttctcggacggcggcctcaccgat
ctgctcgacgcccgcagcctccacggctcccctgacattggaaagagaatgcagttccat
tcttctctagtacaaaggcttgctttagaaaaggagattgagggccacgtaggttgcgtg
aatgctattgcatggaactcaagtggctcacttctgatatcaggatcagatgacactaga
gtcaacatctggaattatgctaatcaagagctgttgcatgaaattgatactggacattca
gcaaatgtattttgcacaaaatttgtaccggaaacatgtgatgaagtagtagtttcagga
gcaggagatgccgaggttcgtgttttcaatttgtctcgtttaagtggcataaggcctagg
gagattgccatggagccagctgcagtttaccaatgtcactcaaggagggtcaagaaacta
gctgtcgaaggtggtaaccctaatgtagtgtggagtgcaagtgaggatggtactataaga
cagcatgattttagggaatgcagttcctgtcctcgtgcaggattggttaatcaggaatgc
cgtaacgtgcttctagatctacgatctggaggaaagaagtctttagctgatcctcccaga
caaccgatgtcgtttaagtcttgtgatattagctcagttcgtccccatcagctccttgtt
ggtgggagtgatgcgtttgcccggctgtacgataggagaatgcttccaccattgagctca
tgtcaaacaagaaggaagccaccgccttgtataaaaatgttctgtccattgcaccttgct
gagaataggaagtcaagtttgcaccttacccatgttgcgttcagcccgaatgggaatgag
gttcttttgagttacagtggtgaacatgtatatctatttgatgtcgacccagacaatacg
agtccagtgagatacacagcagatgatgtacgcgatcagttatgtttactgccttttcac
aaggaaccaagaaaacaaaagtcaaaacgagataagtttccagctaagagaaatttgtgt
agggtagatatgttgaagaaacttacgcaagtggtgataaaatctctggagactggcaca
aacctaatgcatggcattgaagcatgctgtgaaatacttgaggccatggaatctgatatt
gatgatagcacgaggcatgattgtttgtgtacccgtgcaggattgtacctaaagcggagg
tggaaaaatgatgtttacatggctattcgggattgcaacgaagcaaggagtattgacttt
gcatcattccaggcacacttgttcatggctgatgcactgttacagataggaagactgaag
gaggcacgtgaatatgcagaagctgcacatagtcttgttccaccaaattcggtgtctgcg
gaacaggtggaaaatataaagaagcgacttgctgctgctgaacttgagaaaaataaaaaa
gatcaacaaggaaatactaacactgatgcgcggcatggacggttacggtcattgagtgat
ctactgttcagatcagatgttagtgggtcatcatcacaggagggccgggaagattcagat
tacgatgatgagatggagttagactttgatacatcagtatcgggtgacgaaagccgtgat
agtgatccaggtgccgttcgaggtagcttacgtctaaaattgcaccgaagagaggatcaa
cctaatgaacagtctgttgggaatggatcagctgagtccacttgtaatggcgattctgcc
tatgagccggatgttgccattgatatgaaaaaaagatatgttgggcactgcaacgtgggg
acagatataaagcaagctagctttcttggtgaacaaggggaatttattgccagcggaagt
gatgatggtagatggttcatatgggagaaaagaacaggaaggcttgttaaaatgcttgca
ggggatggagctgttgtgaactgtatacagtctcatccctatgattgtgctgttgcaacg
agtggaattgacaatacaataaagttatggacaccggatgcagaaggtacttctatggtt
gatggaccagaaattgatgtgttaagtgccatagagaacaatcagaagaagttatgccgc
aaccgtgaaactttgctgccttttgagtttttggaacgatttggggcgcatgaatttgct
gaaggaagcttgcatcctttagagtgtgcgcagacttga
DBGET
integrated database retrieval system
