Aegilops tauschii (wheat D): 109739341
Help
Entry
109739341 CDS
T04345
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03018
RNA degradation
ats03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109739341
09123 Folding, sorting and degradation
03018 RNA degradation
109739341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109739341
03041 Spliceosome [BR:
ats03041
]
109739341
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109739341
mRNA degradation factors
5'-3' decay
Lsm complex
109739341
Spliceosome [BR:
ats03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109739341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
109739341
NCBI-ProteinID:
XP_020154017
LinkDB
All DBs
Position
3:complement(168677778..168682179)
Genome browser
AA seq
143 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPPGVGRGRGRGDIGTKPGGRGIGRGQDDG
KGGGRGRGGIGSKGGNKGGRGRG
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccctctcgctcctcaagaccgcccaggggcatcccatgctcgtggagctcaag
aacggcgagacctacaatggtcacttggtgaactgcgacacgtggatgaacatccacctc
cgggaggttatttgcacctcgaaggatggtgataagttttggaggatgccggagtgctat
attcgtgggaacacaatcaagtatcttcgggttcctgatgaggtgattgacaaggttcaa
gaggaaacttctaagagtagatcagataggaagccaccaggtgttggccgcggaagagga
agaggagacatcggcactaagcccgggggcagaggaatcgggcgtggccaagatgatggc
aaaggtggtggccgtggaaggggtgggattggaagtaaaggtggcaacaaaggcggacgt
ggtcgtgggtaa
DBGET
integrated database retrieval system
