Aegilops tauschii (wheat D): 109739851
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Entry
109739851 CDS
T04345
Name
(RefSeq) zinc finger CCCH domain-containing protein 27
KO
K13192
RNA-binding protein 26
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ats01009
]
109739851
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109739851
03041 Spliceosome [BR:
ats03041
]
109739851
Protein phosphatases and associated proteins [BR:
ats01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109739851
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
109739851
Spliceosome [BR:
ats03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109739851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
zf_CCCH_4
RNA_bind
RRM_PARP14_3
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
109739851
NCBI-ProteinID:
XP_020154504
UniProt:
A0A453A012
LinkDB
All DBs
Position
1:491815893..491823719
Genome browser
AA seq
925 aa
AA seq
DB search
MHKGSIAQALDADKIEVPSPKEESNSTDSEAATDTENFEISDDDDDDRNHKHRRREAMPQ
PFGESIEEQAAGRPFKRRPRISGNGQPFGGADSRGEAQNNFIPKFKRRPGPGAHSRGGRV
NQSFHSASAAARPPMTRGRGRNGAPWTHHDPRFNTLDMIDFASQMASQGPPTHPNLFMGP
PLPSGGGAQNGPWGPYGFMPGMPNGMMDPIHPLGMQGPIQPPLIDLGMPRQRCRDFEERG
FCLRGDMCPMEHGVNRIVVEDMQSLSQFNLPVSVPNAPGLGIQSEAGTAHVNLTNLGGSK
GVPAKDMKSGVADNPSKLNGSTVSAVADADVYDPDQPLWNNERPEASIAGFAHTNDGIWN
AETSSYEAGWEHANQGFAADDSQNPKSSVWGRIASKRKSGPGKTANTTSTSATGNQRSDY
NDDMGPSTVQVKPASTKDTNGRPSSRMSADVGRQSNSRTSHKASRTLYVNGIPPESNRWE
ALLSHFEKFGQVIDIYVPANSEKAFIQFSKREEAEAALKAPDAVMGNRFIRLWWANRDRI
TDEGDGRISAKPPLTNSALPQPSSSNRGKDLQSTTPRASSGSSASGPGIGPKKLPANSIT
SIPPAPKRQENLEMLEAIRKKQDMLAQQRDELLQRLEKYAKQTSSANSVKQAEAGGKTVG
SNAVGKVGDVSSMNTGTEGPQEVAGTLENKISGELASSSPKYAPTSTQKPAVAARQLSPL
LAPPQNRFKLDNRTTSFRILPPLPPEIANETVLKDHFAAFGELSSVVLEDTEAHNHDTTL
KPSLSCSACVTYATRQSAEKAFISGKSCKGHMLRFMWLTASPGSNNQSRPQKSLIPVRPS
GISGQTGNMTSESQSPVGKISSAAASGTAAIPHSESVPSAESSKTFPVGISKELPSVSSL
SSNVECPPGNDSTMNAVFTDPGLPQ
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaagggtctatagctcaagcattggatgctgacaaaatagaagttccttcacca
aaggaagaaagtaattccaccgattcggaagctgctacagatactgaaaactttgaaatt
agtgatgacgacgatgatgatcgtaatcacaagcaccgaagaagagaggctatgcctcaa
ccttttggtgagagtatcgaagagcaagctgcagggaggccttttaaaagaaggcccagg
atttctggtaatgggcagccttttggtggagctgattcacgtggggaagcacagaacaac
ttcataccaaaattcaagaggcgtcctggaccaggagctcacagtcggggaggtagagtg
aaccaatccttccattcagcttctgctgctgctcgccctcctatgacacggggaagagga
cggaatggtgcaccctggactcatcatgacccaagatttaacacacttgacatgattgat
tttgcatcacagatggcctcacaaggaccgcccacgcatcctaacttatttatgggtcct
ccactgccgagtggtggtggtgctcaaaacggtccgtggggtccgtatggatttatgcct
ggaatgcctaatggaatgatggatccaattcacccacttggaatgcagggccctattcag
cctcctttaattgatcttggcatgcctcgtcaacgttgtagagactttgaggagcgtgga
ttttgcttgagaggggatatgtgccccatggagcatggtgtaaatagaattgttgttgaa
gatatgcagagcctatcacagttcaatcttccagtctcagttccaaatgctccaggacta
ggaatccaaagtgaggcaggaactgctcatgttaacttaacaaacctagggggcagtaaa
ggtgttcctgcaaaagatatgaaatctggtgtggcagataatccatcgaagctaaatggg
agcactgtttcagctgttgctgatgctgatgtatatgatcctgatcagcccctgtggaac
aatgaacggcctgaagcatctattgctggttttgcacatactaatgatggaatatggaat
gctgaaacctcaagctatgaagcagggtgggagcatgcaaaccagggttttgcagctgat
gattcacaaaatccaaaatcttctgtttgggggagaatagcatcaaagagaaaatccggg
cctggtaaaacagctaatactacttcgacaagtgcaactggaaaccaaagaagtgactac
aatgatgatatgggtcctagcactgtccaagtaaagcctgcttctactaaggatactaat
ggtcgacccagttcaagaatgtctgcagatgtgggccggcaaagtaatagcaggacctct
cataaagcatctcgcacactttatgtaaatggcattccaccagaaagcaacagatgggag
gcccttctgtcgcacttcgaaaaattcggtcaagtaatagatatatatgttccagctaac
agtgagaaagcttttatccagttctctaaaagggaagaagctgaagctgctctaaaagct
ccagacgctgtgatgggaaaccgttttataaggctgtggtgggctaacagagacaggatt
actgacgagggagatggtagaatctctgcgaaacctccgctgacaaattctgcccttccc
caaccatcttcatccaacagaggcaaggatcttcaatctacaactccaagggccagttct
ggatcttctgcatcaggccctggtataggtcctaaaaagttgcctgcaaacagtataaca
tcaatacctcctgctcccaaaaggcaagaaaatctggaaatgctggaagcaattcgtaaa
aaacaagatatgttagctcagcagcgtgatgagttacttcagcggttagagaaatatgcg
aaacaaacaagttcagcaaattcagtaaaacaggcagaggctggtggaaaaacagttggg
tcaaatgctgtggggaaagtgggcgatgtcagttccatgaacactgggacagaagggccg
caagaggtcgctggtacactggaaaataaaatttctggggagttggcttcatcttcccca
aaatatgctccaacatccacacagaaaccagctgtagctgcgaggcagctatctcctctg
ttagcaccaccgcagaataggtttaagcttgacaaccggaccacatcgtttaggatcctt
cctcctttgccacctgaaatcgcaaatgaaactgtcttgaaagatcattttgcagcattc
ggtgagctttcatctgttgtactggaagacaccgaagcccacaaccatgatacaacctta
aagccttccctgagttgctcggcttgtgtgacgtacgcaacgaggcaatctgctgagaaa
gcatttattagtggcaaatcttgtaaagggcacatgctacggtttatgtggttgacggcc
tctcctggctctaataaccaatcgaggcctcagaaaagtttaattcccgtcaggcccagt
ggcatctcaggccaaactggcaacatgacatctgagtcccaaagccccgttgggaaaatt
tcatctgctgccgcatctggtacagcagccattcctcatagtgaatccgttccaagtgca
gaaagttcaaagacatttcctgttgggatttccaaagaattaccttccgtttcctctcta
tcatcaaatgttgagtgtcctcctggaaatgattccacaatgaatgccgtctttacagac
ccgggtcttccacagtga
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