Aegilops tauschii (wheat D): 109740536
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Entry
109740536 CDS
T04345
Name
(RefSeq) UV-stimulated scaffold protein A homolog isoform X2
KO
K23720
UV-stimulated scaffold protein A
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
109740536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ats03400
]
109740536
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
109740536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
109740536
NCBI-ProteinID:
XP_020155174
LinkDB
All DBs
Position
3D:577469412..577472380
Genome browser
AA seq
703 aa
AA seq
DB search
MPRASVRPPPSEQGPSASPSSTPAADSSIVALIDRATSTTAPSVDPALLHAIKSSARASD
GAVRDAFRLLLSLMAKPHSHVRLLAFSIVDELFMRSKLFRTLLADALDGFVPLAVGFRTN
EQLPPPAASAATLRKAAIQALERWHHLFGVYYRQLRLAIEYLKSSARIQFPGLRGAVEAR
AAREARTQEILTAKVEQLRSTIESIKAEIRSTIQEIRNGLDIIRAEYEKFERYADDDDEE
IASMAMRSIRTASLMAGQWVPETQENEAVFDALREAYRLLVSKHFSTIQDWISVLVRVNL
ADNRFRDSALKEFIDVKNEIRAVRGQCNELGLDLDNVRRKKDVQEEDEEDWVEGKIEVPS
PPRVDSTVDVAGSSKDNRKGKRVVGEVNSGNSDIPIGGNRSQEMDPERKKLLSEAPLVSW
SSVLDRWGSNMDAHVNQRGLELESHWGRMDNDAVIPAAKIAELNVHHSVYKEEPVEILPC
HAPLKKGGLCQRRDLKICPFHGPIIPRDARGNPIGKIGDSSDAGGDPLEQKVDIREAGGD
PIKTNGGSDSESTQEGQGPSTSMMANINNDTSDIDISKITVDQLAMQAIKNVRKRDMDDK
ARERAQRARIRQHNEDVLRQAAIASTPHSAAAYGQPSEALGRRGRRRGKTKEPTLSSMLK
KKVTTKDRISGRLLNGRARDATIREASNTEDMTYREAFPNQWQ
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtgcctccgtccggccgccgccgtcggagcagggcccgagcgcctccccctcc
tccaccccggcggcggattcctccatcgtggccctcatcgaccgcgcaacctccaccacg
gccccctccgtcgaccccgcactcctccacgccatcaagtcatcggcgcgcgcctccgac
ggcgccgtccgcgacgccttccgcctcctcctctccctcatggccaagccccactcccac
gtgcggctcctggccttcagcatcgtggacgagctcttcatgcgctccaagctcttccgc
accctcctcgccgatgcgctcgacggattcgtcccgctggccgtaggcttccgcaccaac
gagcagctccccccgcccgctgcgtcagctgccacgctccggaaggccgccatccaggcg
ctcgagcgctggcaccacctcttcggcgtgtactatcgccagctccgtctcgccatcgag
tacctcaagtcatccgcccgcatccagttccccggtctccgcggggccgtcgaggcccgt
gccgcgcgggaggcacgcacgcaggagatcttgactgccaaggtcgaacagctgcggtcc
acgattgaatccataaaggctgaaatccggtccaccatccaagagatccgcaacgggctg
gacatcatccgggctgagtatgagaaattcgagcgttatgcagacgatgatgatgaggag
attgcttcaatggcgatgcggagtatcaggacagcatcgttgatggccgggcagtgggtg
cctgaaactcaggaaaacgaggcggttttcgatgcgttgagggaggcgtacaggctcctt
gtatcaaagcatttcagcaccattcaggattggatatctgtgcttgttagggtcaatctt
gcagataatcgtttcagagattctgcgctcaaggaattcatcgatgttaagaatgaaata
cgcgctgtaagaggccagtgcaatgagcttggtcttgatcttgataatgttcgtaggaag
aaggatgttcaggaggaagacgaagaggattgggtggaggggaagattgaagttcctagt
cctcctagagttgatagcactgtagatgttgcaggttccagcaaggacaataggaaggga
aagagggtggtgggtgaagtgaattctggcaatagtgacatacctattggtggcaataga
tctcaggagatggatcctgagagaaaaaagctcctttccgaagcccccttggtatcatgg
agctctgtcttggaccggtggggttcaaatatggatgcgcatgtaaaccagagggggctt
gagctcgagagccattgggggaggatggataatgatgctgttatacctgcagcaaagatt
gcagagttaaatgttcaccattctgtttataaagaagagccagttgagatcctaccatgt
catgcacctctgaagaaaggaggtctttgccagagaagggatctcaagatatgccctttt
catgggcccatcatcccacgtgatgcaagaggaaatccgattggaaaaattggtgacagt
tctgatgcgggaggcgatccgcttgagcagaaagtagacattcgtgaggcaggaggagat
ccgatcaaaacaaatggaggcagtgatagtgaaagtacacaggagggtcaggggccctct
acgtcaatgatggcaaacataaataatgacaccagcgacattgatattagtaaaattaca
gtggatcagctggcgatgcaagcgattaagaatgttcggaaaagggatatggacgacaaa
gcacgggaaagagcccaacgtgcgagaatccgccagcacaatgaagatgttctgcggcaa
gcagctattgcttcaacgccccactcagcggcagcatatggccagccttctgaagcactg
ggtcgacgtggtcgacgtcgaggtaagacgaaggaacctacactatcatcaatgctgaag
aagaaagttaccacaaaagataggatttcagggaggcttctaaatggtcgtgctagggac
gcaacaataagagaagcttctaatactgaggatatgacctacagggaagcattcccaaat
cagtggcagtga
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