Aegilops tauschii (wheat D): 109740607
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Entry
109740607 CDS
T04345
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109740607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109740607
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
109740607
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
109740607
NCBI-ProteinID:
XP_020155255
LinkDB
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Position
7:complement(423133154..423134819)
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AA seq
212 aa
AA seq
DB search
MGLEMAPVEEERSPEQPELQIYPLCRYYFGARDARPCAGETAADRALRLKANFAARGLRT
CVHGVLLVELSGHPHVLLLQVRNSSFLLPGGRLRPAEQDVQGLKRKLSSKLAAADRNGDH
HWQIGECIGMWWRSEFEARPFPYPPPNTRAPKECVKLFLVRLPMARQFVVPRNLKLLAVP
LSQIHDNPQVYGPIISGVPNLLSKFSFNLVRD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggggctggagatggcgccggtggaagaggagagatcgccggagcagccggagctgcag
atttacccgctgtgccgctactacttcggcgccagggacgcccggccatgcgccggcgag
actgccgccgaccgcgccctccgcctcaaggccaacttcgcggctcgcgggctccggacc
tgcgtccatggcgtcctgctggtcgagctctcgggtcacccccacgtgctgctcctgcaa
gtcaggaactcctccttcctgctcccgggcggccgcctcaggcctgccgagcaagatgtc
caaggcctgaaacgcaagctctccagcaagctagcggccgcggatcgaaacggcgaccac
cactggcagatcggggagtgcattggcatgtggtggagatccgaattcgaggccaggccg
tttccatatccgcctccgaacactcgtgcacccaaggaatgcgtaaagctgttcttggtt
aggctgcccatggctcgccagttcgtcgtgccgaggaacctcaagctcctagccgtgcct
ctgtcccagattcacgacaatcctcaggtatatggtccaatcatatctggagttccgaat
ctgctctccaagttctccttcaaccttgtcagggactga
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