Aegilops tauschii (wheat D): 109740733
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Entry
109740733 CDS
T04345
Name
(RefSeq) protein TRANSPARENT TESTA GLABRA 1
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109740733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ats04121
]
109740733
03036 Chromosome and associated proteins [BR:
ats03036
]
109740733
Ubiquitin system [BR:
ats04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109740733
Chromosome and associated proteins [BR:
ats03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
109740733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_1st
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_RIG_2nd
WDR55
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
EIF3I
MIOS_WD40
WD40_RFWD3
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
109740733
NCBI-ProteinID:
XP_020155373
LinkDB
All DBs
Position
6:complement(367859812..367865404)
Genome browser
AA seq
460 aa
AA seq
DB search
MTIPIAFSGQNLTRTTLLCSGNSSVLLPCAAHCTRRPAAPSISTLVLTCQVSVHPPPAGV
HETTRALKLPPHPRRKTITQARSPSSQRHKSTPKSTRNRANPLPMDQPKPTPSAAASPAG
ADAAPNPYAFTCELPHSIYALAFSPSAPVLAAGSFLEDLHNRVSLLCFDSVHPTAASFRA
VPSLSFDHPYPPTKLQFNPRAASTPLLASSSDALRLWHAPLDDLSASAPAPELRSVLDNR
KASASDFCAPLTSFDWNEIEPRRIGTASIDTTCTVWDIERGVVETQLIAHDKAVHDIAWG
EAGVFASVSADGSVRVFDLRDKEHSTIVYESPRPDTPLLRLAWNRYDLRYMAALLMDSNA
VVVLDIRAPGVPVAELHRHGGCVNAVAWAPQAARHLCSAGDDGQALIWELPEAPAAVPPE
GIDPVLVYDAGAEINQLQWVAGHPDWMGISIENKVQLLRV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcccgatcgcgttttccggtcaaaatctcactcgaacgacactcctttgctct
ggaaattcgtcggtcctcctcccgtgcgccgcgcactgcacccgtagaccggcggctcca
tcgatttcaaccctcgtgctcacttgccaggtctccgttcacccgccgcccgctggagtg
cacgagacgacgagagcgctgaaacttcctccacacccccgccgtaaaacaatcacccag
gccaggagccccagcagccagcggcacaagtccacccccaaatccacacggaacagggca
aaccctctccccatggaccagccgaagccgacgccgtcggcggccgcctcgccggcgggg
gcggacgcggcgcccaacccctacgccttcacgtgcgagctcccccactcgatctacgcg
ctggccttctccccctccgcgcccgtcctcgccgccgggagcttcctcgaggacctccac
aaccgcgtctccctcctctgcttcgactccgtccaccccaccgccgcctccttccgcgcc
gtcccctccctctccttcgaccacccctacccgcccaccaagctccagttcaacccgcgc
gctgcctccacgcccctcctcgcctcctcctccgacgccctccgcctctggcacgccccc
ctcgacgacctctccgcctccgcccccgcccccgagctccgctccgtcctcgacaaccgc
aaggcctccgcctccgacttctgcgcgcccctcacctccttcgactggaacgagatcgag
ccccgccgcatcgggaccgcctccatcgacaccacctgcaccgtctgggacatcgagcgc
ggcgtcgtcgagacgcagctcatcgcgcacgacaaggccgtgcacgacatcgcctggggg
gaggccggcgtcttcgcctccgtctccgccgatggctccgtccgcgtctttgatctccgg
gacaaggagcactccaccatcgtctacgagagcccccgcccggacacgccgctcctcagg
cttgcctggaaccgctatgacctacggtacatggccgccctgctcatggacagcaacgcc
gtcgttgtgctcgacatacgcgcacccggggtgcctgtggccgagctacatcggcatggg
ggatgcgtcaacgctgttgcgtgggcaccgcaggctgcaagacacctctgctccgcaggg
gacgacgggcaggcgctcatctgggagctgcctgaggcaccggcagcagtgcctcccgaa
gggattgatccagttcttgtttatgatgcgggtgccgagataaaccagctgcagtgggtg
gccggacacccggactggatgggcatttccattgagaacaaggtccagcttctccgggtc
tga
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