Aegilops tauschii (wheat D): 109740760
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Entry
109740760 CDS
T04345
Name
(RefSeq) transcription initiation factor IIF subunit alpha isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109740760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ats03021
]
109740760
Transcription machinery [BR:
ats03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
109740760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
ELL
zf-RING_5
DUF3069
Motif
Other DBs
NCBI-GeneID:
109740760
NCBI-ProteinID:
XP_020155399
UniProt:
A0A452Y9N3
LinkDB
All DBs
Position
1:187461283..187472206
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AA seq
531 aa
AA seq
DB search
MGSVDLVLKPACEGCGSTSDLYGTGCKHTTLCSSCGKSMALSRARCLVCSAPITNLIREY
NVRANASTDKAFSIGRFVTGLPPFSKKKNAENKWSLHKEGLQGRQLTDKMLEKYNRKPWI
LEDETGQYQFQGHMEGSQSATATYYLLMLHGKEFHAFPAGSWYNFSKVAQYKQLTLEEAE
EKMNKRKTSATGYERWMMKAATNGPAAFGSDMMKLEPANDGEKESARHKKGKDNEEGNNS
DKGEENEEEEAARKDRLGLSKRGMDDDEEGGKDLDFDLDDDIEKGDDWEHEETFTDDDEA
VDIDPEERADLAPEIPAPPEIKQDDEENEEEGGLSKSGKELKKLLGRSSGQNESDADDDD
EEDDQDDESSPVLAPKQTDQPKDEPVDNSPAKPTPSSGHARSTPPASKSKQKRKSGGDDA
KASSGAASKKAKVESDTKTSSIKEETPSSSKPTPKASASSRSANVSPVTEDEIRTVLLAV
APVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKIQKTNGHNYVVLREDKK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgtagacctggtgctgaagccggcgtgcgagggctgcggctccacgtcggac
ctctacggcactgggtgcaagcacaccacgctctgtagctcctgcggcaagtccatggcg
ctttcccgcgcccgatgcctcgtctgctctgcgcccatcacgaacctcatccgggaatac
aatgtgcgggcaaatgccagcacagataaggcattctctattggaagatttgtaactggt
ttgccgccattctcaaagaaaaagaatgctgagaacaaatggtctcttcataaagaaggc
ctgcaaggacggcagcttactgacaaaatgctggagaaatacaacaggaagccatggatt
ttggaagatgaaactggtcaatatcagtttcaaggtcatatggagggatcacagtcagca
acagctacatactatttgttaatgttgcatggcaaggaatttcacgcatttcctgctggt
tcctggtataacttcagtaaagttgcgcagtacaagcagctgactctggaagaggccgag
gagaagatgaataagagaaagactagtgcaactggttatgaacgttggatgatgaaagca
gctacaaatgggccagctgcctttggttcagatatgatgaaacttgagcctgctaacgat
ggggaaaaagaaagtgctcgtcataagaaggggaaagataatgaggagggtaataattct
gataaaggtgaggagaatgaagaagaggaagccgctcgtaaagataggctcgggctctct
aaaaggggcatggatgacgatgaggaaggtggaaaagatctagattttgatttggatgat
gacattgagaaaggtgatgactgggaacatgaagaaacattcaccgatgatgacgaggct
gtggatattgacccagaggagcgggcagatttagctcctgaaattcctgctccacctgaa
attaagcaggatgatgaagagaatgaggaagaaggtggcctgagcaagtcaggaaaggaa
ttaaagaagctgcttggtcgttcttctggacaaaatgagtcggatgccgatgatgatgat
gaagaagatgatcaggatgatgagtcatctccagtgcttgctccaaagcagacggatcaa
ccaaaagatgaacctgttgataacagcccagccaaacctacaccttcatcaggacatgct
cgtagtacacctcctgcatcgaaatccaagcaaaagaggaaatcaggtggtgatgatgcc
aaagcatctagcggtgcagcttcaaagaaagcaaaggtggaatctgatacaaaaacatca
agtatcaaagaggagacaccatcttcctcaaaacctacaccaaaggcctctgcttcatca
agaagtgccaatgtatctcctgtgacagaggatgagatcaggactgttcttcttgcagtg
gctcctgtcactacacaagatttagtctccagatttaagtctagactacgaggtccagag
gacaagaacgcctttgctgaaattctgaagaaaatttcgaaaatacagaagactaatggc
cacaactatgttgtccttagagaggataagaaatga
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