Aegilops tauschii (wheat D): 109740780
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Entry
109740780 CDS
T04345
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB1-1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03022
Basal transcription factors
ats03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109740780
09124 Replication and repair
03420 Nucleotide excision repair
109740780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ats03021
]
109740780
03400 DNA repair and recombination proteins [BR:
ats03400
]
109740780
Transcription machinery [BR:
ats03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109740780
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109740780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
RasGEF
Motif
Other DBs
NCBI-GeneID:
109740780
NCBI-ProteinID:
XP_045091035
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Position
3D:533526792..533536453
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AA seq
600 aa
AA seq
DB search
MGTMTIGAKYKTTLKDPGHGGVLRMSEDKLIFTPNDPRSLMKLNVDFRSIKGHKFNKVDG
SKPTPPLLNLSKDSDKGGGYIFEFDNVGNRDLCRDFVARVLGKHQGTVPARTNVPSEKSA
VSTGPEQLSSAEMERRMKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDETNKAS
KQKPGFKSAMLADVRPSADGQTNKVTFSLTTEIIHQIFAEKPAVHRAFLDYVPKKLSEKD
FWTKYCRAEYLLRTKNTLAAKAEAADDEELAMFLKNDDILAKEAKLKIKRVDPTLDMEAD
AGDDYIHLPDHGILRDGSRETADIDSELARRTLSQDLNRHAAVVLEGRSTDIESTDTKTV
AEALARSKKEPPPSSAADDASHERLVKVARMTEIEDLQAPRSLPYAPLCIKDPREYFDSQ
QANALRPLGSNDGRKARSCSLSTDDAFRHLMDQISSVKMNCPVVQSDVALKVLNELNEGI
SRSRRLNLKNPQDSLLGRLPHRTRDELMDHWTAIQELLRHFWSSYPITTAVLSNKVQRLK
EAMTQIYQKLQDIKESAQPDVRHEISQLVKPMTQALDAAFYHDQQQKSSKAGTGSKPNGF
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggggaccatgacgatcggtgccaagtacaagaccacgctcaaggaccccggccacggc
ggcgtcctccgcatgagtgaagacaagttaatatttacccctaatgatccacgctcacta
atgaagctcaatgttgatttccgaagcatcaaaggccacaagtttaacaaggtagatggt
agcaaaccaacgccgccattattgaatctttcaaaagattctgacaaggggggaggctat
atttttgaatttgacaatgttggtaaccgtgatttgtgtcgcgactttgtagctagggtt
ttaggcaaacatcaaggtactgtgcctgctagaacaaatgtaccttcagaaaaatcagct
gtgtcaactggtccagaacagctcagttctgccgaaatggaacggcggatgaaattgcta
cgagaagacagtgaactgcagaagttacataagaagtttgtgcttggcaatattctgcaa
gagtctgaattttgggcaacaagaaagaatttacttgacgatgaaacaaacaaagcatca
aaacaaaagccaggtttcaaaagtgccatgctagctgatgttaggccatcagctgatggg
cagacaaacaaggttactttcagtctgactactgagattatccatcagatttttgcagaa
aagccagccgtgcatcgggcatttttggattatgtcccgaagaagttgtcagaaaaggat
ttttggacaaaatactgtagagctgagtatctacttaggacaaaaaatactttagcggca
aaagctgaagccgctgatgatgaggaattagccatgtttttgaaaaatgatgatatactt
gccaaggaggcaaagctcaagataaaacgagttgatccaacattagacatggaggcagat
gcaggggatgactacatccatcttccggatcatgggattctccgtgatggcagcagagag
acagctgatattgatagcgagttggctaggagaacactttctcaggatctgaatcggcat
gctgctgttgttcttgaagggagatcaacagatattgaatcaactgatacaaagactgtg
gctgaagcacttgcaaggtccaagaaggaaccacctcctagctctgctgctgatgatgct
agtcatgagagattggtaaaggtggcccgcatgactgagatagaggatctgcaagctcca
cgaagtctcccatatgcaccactttgtataaaggatcctcgagaatattttgattctcag
caagcaaatgctctgagacctttaggtagcaacgatggaagaaaggcccgcagctgcagc
ctgagcaccgatgatgcattccgtcatttaatggatcaaatatcttccgtgaaaatgaac
tgtcctgttgttcagtctgatgttgctctaaaggttcttaacgaattgaatgaaggaatt
tcgcgttcacggaggctcaatcttaagaatccccaagacagtctccttggtcgtcttcct
caccgaacacgagatgaacttatggatcattggacggctatccaggagttgctgcgccat
ttttggtcatcatacccaataacaaccgcagtccttagtaataaggttcaacggctgaag
gaagcaatgacacagatatatcagaagttacaggatataaaggaatcggcacagcctgat
gtacggcatgaaatatctcaactcgtaaagcccatgacacaggcgctggatgctgcattc
taccatgaccagcagcagaaatcttcaaaggccgggaccgggagcaagcccaatgggttt
tga
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