Aegilops tauschii (wheat D): 109741274
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Entry
109741274 CDS
T04345
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109741274
03036 Chromosome and associated proteins [BR:
ats03036
]
109741274
Enzymes [BR:
ats01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
109741274
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109741274
Chromosome and associated proteins [BR:
ats03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
109741274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_30
AAA_19
ResIII
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA_16
UvrD_C_2
AAA
ATPase_2
Helicase_RecD
Mg_chelatase
DEAD
Terminase_6N
NPHP3_N
AAA_7
AAA_24
Motif
Other DBs
NCBI-GeneID:
109741274
NCBI-ProteinID:
XP_020155939
UniProt:
A0A453ITY3
LinkDB
All DBs
Position
4:complement(455192654..455197569)
Genome browser
AA seq
964 aa
AA seq
DB search
MGHHSDDEYSVAGDKPEVEFMDFQNDNTLQDYQSDDGPVVVTAPFPFVNGKPKSVLVGQT
SADAICIENTSCEPVNLWSVRIFSSNPEDSYVLSMMRPPLNDSDEAAKKAFLGLTSVEDR
TLQPGQTLTIWLSCMPKDIGLHTSIVHVDIGDEKIERVAFLLADDNVSMALSSDKPYSRR
QGSQRKQFECNTFVPGSRPIRQHTQGFKYKLPQYAIPVEIRELIECKQRPDVLSEELSMM
NYAKFFSTLLVMEELNLEEEMRSYDMERVSMRRRGNDYLSLEVPGLAEKRPSLVHGDYII
ARHAGSDARPYQGYIHKVEADEIFLRFDDQFHHAHHDRNKYDVSFTYNRLNMRRQYRSVH
DAELIGPDILFPSLSRYRSVKKVPFKPLNPNINTEQADAVGMILGCRGVTPYVIYGPPGT
GKTMTLVEAILQLYKSNRRANVLICAASNSAADHVLEKLLSSSYPIRPSDIFRLNAPSRQ
YDDVNPDFIRFCFFEDMVFKCPPMRALMRYKIVISTYMSSSTLQAEGIRPGHFTHIFLDE
AGQSSEPEAMVPLAALCGRDAVVVLAGDPMQLGPVVFCKQADQDGLGKSYLQRLLGEFEQ
YHSGDPNYVTKLLRNYRCHPAILELPSQLFYEGELIPCKGDEVPSVYDCIGLPNKSFPVL
FVGIQGCDEREGNNPSWFNRIEVSKVVNIIRTLTRNGDVSEADIGVITPYRQQVNKIKKA
LETFEMPDLRVGSVEQFQGQEREVIIISTVRSTVKHNEFDRFFNLGFLSNYRRFNVAITR
AKSLLIIVGNPHIITKDRHWDKLLRYCADNGSYQGCPLPPPEEEVRYSGYGDTRDQPAGD
GWGYNQEEPANHIHNQDPSDSGFRHDNGRSSTAHEEEWSEEWSKKKPDGDFHSYPDAGAE
PQEETQQKQQHVEEGATTTGQDGVQAAQCSANDVDGVVQDAYVQKYTFPPGWGDVSSIPA
TGWE
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggggcatcattcagatgatgagtactcagtagctggtgataagccggaagtagagttc
atggattttcagaatgacaacactcttcaggactatcaatctgatgatggtcccgtggtt
gttacagctcctttccctttcgtgaacggaaagcctaaatctgtccttgttggacaaaca
tctgcagacgccatttgcatagagaatacctcttgtgagcctgtaaatttgtggagtgtg
agaatattctcttcaaatccagaagatagttatgtcttgtcaatgatgagaccaccattg
aatgattccgatgaagcggcaaagaaggcttttcttggtttgacttctgtggaagatcgt
acacttcagcctggacaaaccctaaccatttggctgtcctgtatgccaaaagacattggt
ttgcatacatcaatcgtgcatgttgatattggggatgagaagattgagcgtgtggctttt
ctgttggccgatgataatgtttcgatggccttatcttctgataaaccttattccaggaga
caaggctctcaaaggaagcaatttgagtgtaatacatttgtgccaggtagccggccaatt
cggcagcacactcaaggattcaagtataagctacctcagtatgcaatacctgtggaaatc
cgtgagctcattgaatgcaaacagagacctgatgtcctatctgaagagctgagcatgatg
aactatgcaaagttctttagcactcttttagtcatggaagaacttaatttggaggaggag
atgagatcgtacgacatggagcgtgtgtcaatgagaaggaggggtaatgattatttgtct
cttgaggtccctggtttggcagaaaaaaggccttcgctagtccatggtgactatataatt
gccagacatgctgggagtgatgctaggccttatcagggctacattcacaaggttgaagct
gatgagatatttttgaggtttgatgatcagtttcaccacgctcaccatgacaggaataag
tatgatgttagcttcacatataatagattgaacatgagaaggcaatataggtctgttcat
gatgcagaacttattggacctgacattctatttccctccctatcacggtatagaagtgtg
aagaaggtgccatttaaacctctgaacccgaacataaacactgagcaagctgatgcagtt
gggatgatacttggctgccgaggggttacaccatacgtgatttatggacctccaggaact
ggcaagaccatgacccttgtcgaggcgattttgcagctttataaatccaataggagggca
aatgttctcatatgtgctgcttccaatagtgctgctgaccatgtattggaaaaactgttg
agttctagctacccgatccgcccaagtgatatctttaggctaaatgctcctagtcgtcag
tatgacgatgttaatcctgatttcatacggttctgcttctttgaagatatggtgttcaag
tgccctccaatgcgagcattaatgcgctacaagatagttatatcgacctacatgagttca
tcaaccctacaggccgagggtattcgcccggggcatttcacacacattttcttggatgag
gccggtcaatcttctgaaccagaggcaatggttcctttggcagctttgtgtggaagagac
gcagtggttgtgttagcaggagatcctatgcaattagggccggtggttttttgtaaacag
gcggatcaggatggtttgggcaaatcttatctgcaaaggctgctcggtgaatttgagcag
taccattcaggggatcctaactacgtgacgaagctattgaggaactatcgttgccatcca
gcgatcctagagctgccgtcacagcttttctacgagggtgaacttatcccctgtaaggga
gatgaagtgccatctgtttacgattgcattggccttcccaataagtcattccctgttctg
tttgttgggatccagggatgcgatgagagagaaggaaacaatccatcatggttcaacaga
atcgaagttagtaaagtagtaaatatcatcaggactctgacaaggaatggcgatgtcagt
gaggctgatattggtgtcattactccatatcgtcaacaagttaataagataaagaaggcc
ctagagacgtttgaaatgcccgacctaagagtgggaagtgtcgagcaattccagggccaa
gaaagggaagtgatcatcatctcgacagtcaggtcaaccgttaagcacaacgagtttgac
agattcttcaacctggggttcctgagcaactatagaaggttcaatgttgcaattactcgt
gccaaatcgttgctcattatcgtcggaaacccccacatcatcactaaggatcggcactgg
gataagctcctgaggtactgcgcagacaatggttcttatcaaggatgtccactcccccca
ccagaagaagaggtcagatactcgggatacggcgacacccgagaccagcctgctggtgat
ggttgggggtacaaccaagaggagccagcaaaccacatccacaatcaagacccgtctgac
agtggcttccgacacgacaatggccggtcctcaaccgcacatgaagaagaatggtccgaa
gaatggtccaagaagaagccagacggggacttccattcatatccagacgcaggagcagaa
cctcaggaggagacacagcagaagcagcagcacgtcgaggaaggggctactactaccggg
caggacggcgtgcaggctgcccagtgctcagccaacgacgtcgacggtgtggtccaagac
gcatatgtgcagaagtacacgtttcctcccggttggggtgacgtctcgagcatccccgcg
acaggctgggagtga
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integrated database retrieval system
