Aegilops tauschii (wheat D): 109741403
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Entry
109741403 CDS
T04345
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03030
DNA replication
ats03420
Nucleotide excision repair
ats03430
Mismatch repair
ats03440
Homologous recombination
ats03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109741403
03420 Nucleotide excision repair
109741403
03430 Mismatch repair
109741403
03440 Homologous recombination
109741403
03460 Fanconi anemia pathway
109741403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ats03000
]
109741403
03032 DNA replication proteins [BR:
ats03032
]
109741403
03400 DNA repair and recombination proteins [BR:
ats03400
]
109741403
Transcription factors [BR:
ats03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109741403
DNA replication proteins [BR:
ats03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
109741403
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
109741403
MMR (mismatch excision repair)
109741403
DSBR (double strand breaks repair)
HR (homologous recombination)
109741403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
109741403
NCBI-ProteinID:
XP_020156081
UniProt:
A0A453PRM6
LinkDB
All DBs
Position
6:complement(449502104..449505681)
Genome browser
AA seq
654 aa
AA seq
DB search
MASARLSPNGVGAALAGDTNLRPIVQVVNLRCVNVDGKGTPRSDRWRGLVSDGAETCPAM
FAGQLSDLARSGLIRRGSVVQLDEYVINMVGGRRVIVVLNLTVLLAECDIIGNPVITPES
ESSNQNNPRVEQFNGTRQYGLAAGNPSPTRPNGNVPVFQPSLAGNSLNTATRLSDKSPVF
QPTAQPSYRPAPSYKNQGAIAKNEAPARIIPISSLNPYQGRWAIKGRVTAKGDIRRYHNA
KGEGKVFNFDLLDSDGGEIRVACFNTQLDRFYEVVEVGKVYVVSRGNLKPVQRNYNHLNS
EWEITLERDSSVDLCPDENSSIPSQQYNFRPISEIEDTPTGTILDIIGVAISVSPSTTVQ
KKNGTETLKRIIGLKDMSGRSVDLTMWGDFCNREGSQLQEMVERGVFPVLGVKTGRVNDF
NGKCVGTISSSQLLIDPDLSEAHTLRQWFDGGGRDASTQSISRDHTPAASRNEVRTTVAK
IKDDGLGMGDKPDWVTVKASIIFFKSDNFCYTACPTKEGDRQCNKKVTKGTSGLWVCDKC
DKEFPECDYRYLLQLQIQDHSGTTWVTAFQETAQELLGCSALELITYKENGDPRFAETML
SCLFKDYLLRLKVKEETYSDERRVKNTLVKVERFEPAAESRYLLDLLSRSVASY
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcgaggctgagcccgaacggcgtgggggcggcgctggcgggggacacgaac
ctccggcccatcgtgcaggtcgtcaacctgcgctgcgtcaacgtcgacggcaagggcacg
ccccggagcgaccggtggcgcggcctcgtctccgacggcgccgagacctgccccgcgatg
ttcgccggccagctcagcgacctcgcgcgctccggcctcatccgccgcggctccgtcgtg
cagctcgacgagtacgtcatcaacatggtcggcggcagaagggttatcgtcgttctgaat
ttgacagttcttcttgcggagtgtgacatcattggcaatccagtgattactccagaaagt
gaatcttctaatcaaaacaacccaagagtggagcaatttaacggaacacgtcaatatggt
ttggcggcaggaaacccaagtcccacaaggcccaatggcaatgttccagtcttccaacct
tcgctggcagggaactccttgaacacagccaccaggctcagtgacaaatctccagtcttc
cagccaacagcacagccatcttatcgtcctgcacccagttacaaaaatcaaggagcaatt
gcgaaaaatgaagcccctgctagaataatccccatatcttctttaaatccttatcagggc
cgctgggctatcaagggtagagttactgcaaagggagacatccgccggtaccacaatgca
aaaggtgaaggcaaagtgttcaactttgacctgcttgattctgatgggggtgagatacgg
gtggcatgtttcaacactcaacttgatcgcttctatgaagttgtggaagttggtaaggtc
tatgtggtatcaagaggaaacttgaaacctgtacagaggaactataaccatctgaacagc
gagtgggagattacgttggagagagattcatcagtggatctttgtcctgatgagaacagc
tcaattccttctcagcagtataacttcagaccgatcagtgaaattgaggatactccgacc
ggtactatacttgatatcataggtgttgctatctctgtcagcccttccaccacagtacag
aagaaaaatggcacggaaactctgaaaagaattattggcctgaaggatatgtctggtcga
agtgttgatctaaccatgtggggtgacttttgcaacagagaaggctcacagctgcaagaa
atggttgaacgtggggtcttccctgtgctgggtgtcaaaacaggaagagtgaatgatttc
aatggcaagtgtgtcggcacaatttcttcctctcaactcctcatagaccctgatctctct
gaagctcatactctgaggcaatggttcgacggtggaggaagggatgcttctactcagtcc
atatccagggatcacactcctgcagcatcaaggaacgaggtccgaacgacagttgctaaa
atcaaggatgatggtcttggaatgggagacaaacctgattgggttacggtgaaagcctcc
attatattcttcaagagcgacaacttctgctacacagcttgccctaccaaggaaggtgac
cggcagtgcaataagaaagtgacaaaggggacctctggcttgtgggtgtgtgacaaatgc
gacaaggagtttccagagtgtgactacaggtatcttctgcagcttcagattcaagatcac
tcgggaacaacttgggtgacagcgtttcaggagaccgcgcaagagttactaggctgctcg
gcgctagaactcattacatacaaagagaacggagaccctcgttttgcagagaccatgctc
agctgtttgttcaaggattatctgctcaggctgaaagtcaaagaagaaacgtacagcgac
gagcggagagtgaagaacacattggtcaaagtggagaggtttgagcctgctgccgaaagt
agatatctgctcgatttactttcaaggtcggtggcatcatattga
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