Aegilops tauschii (wheat D): 109741570
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Entry
109741570 CDS
T04345
Name
(RefSeq) ubiquitin C-terminal hydrolase 13 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109741570
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ats01002
]
109741570
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ats04121
]
109741570
Enzymes [BR:
ats01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109741570
Peptidases and inhibitors [BR:
ats01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109741570
Ubiquitin system [BR:
ats04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109741570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
ubiquitin
RA
TRAF_BTBD17
Motif
Other DBs
NCBI-GeneID:
109741570
NCBI-ProteinID:
XP_020156245
LinkDB
All DBs
Position
3:complement(430259463..430280421)
Genome browser
AA seq
1104 aa
AA seq
DB search
MTMVTPRAPEPPPQDQDEEMLVPQQEVEVFEGPQPMEESMPAVDNESLPDASTSRFTWKI
ESISKHSGRKTHSDIFVVGGYSWRVLVFPTGNNVNHLSMYLDVADAKSLPIGWSRSAQFS
LAVINQLDSKHSVRKEVTHTFNSRESDWGFTSFMPLIDLYDPSKGYIVNDQCIIEAEVAV
RKIVDYWNYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTVDTPSGSIP
LALQSLFYRLQHGDNSISTKELTKSFGWDSYESFMQHDVQELNRVLCEKLEDKMKGTIVE
GTIQKLFEGHHMNYIECIGVDYKSTRKESFYDLALDVKGCSDVYASFDKYVAVEMLDGDN
KYQSEKYGLQDAKKGMLFIDFPPVLQLQLKRFEYDHARDIMVKINDRYEFPLQLDLDRDD
GKYLSPEADRSVRNLYTLHSVLVHSGGVSGGHYYAFIRPTLSNQWYKFDDERVTKEDLKR
ALEEQYGGEEELPHTNPGLNMNPLKFTKYSNAYMLVYIRESDKEKIVCDLEETDINEDLK
TRLRKEDEDKENKKKEKAEAHMFTTFKVARDHDLAAQIGRDLFFDLVDYEKIHPIRVLKD
MPFNQVKEEFSKEFGIPVHSQRFWWWSKRQNNTYRPTRPLTQQEESYTVGQLKDAAIRMN
SSELRLYLEVVQENHLTLASRTKDDILLFFKLYDPEKEELRYVGNLLLKASSKPSDIVPK
LNEIAGFQHDEDIELYEEIKFEPNIMCEPVDCDVSFSLNQIADGDILCYQKRCSLDQHRH
PNVSSFFEYVHNRQVVHFRLLEKPKQDDFSLELSKRSTYDDVVEKVAQHLGMDDPSKLRL
TQHIPHLQQPKHQYIKYRSIDHLSDMLLLRNPNQMSDILYYEILDIPLPELQGLITLRVA
FHQATPNEVLFHIIRLPKGSTYSDLIDDLKSKVQLSRSDAELRLFQVNNNKIWKVYLPTE
KIDAVHDPNVPLHVEEIPEVEKSAGPRDRLVHVVHFFKDNQHIQYYGVPFFFLIREGEAL
SDIKVRIQKKFEVPDEQFLKWKFAYVAYNRPDYLQDSDIVLSRFQQKNIYGPWEQSLGLE
HSDMPTKRANQNRHSFEKPVKIYN
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggtgactcctcgcgcccccgagccgccgccgcaggaccaggacgaggagatg
cttgtgccacaacaggaagtggaggtctttgaggggccgcagccgatggaagaatccatg
ccagctgttgacaatgaaagtttgcctgatgcatcaacttccagatttacatggaagatt
gaaagtatatccaagcacagtggtagaaaaacccactctgatatttttgtggttgggggt
tacagctggcgagtgttggttttccccacaggaaacaatgtaaatcacctttcaatgtat
ctggatgttgctgatgccaagtctttacctattggctggagtaggagtgcccaatttagc
cttgctgtgatcaaccaattagacagcaagcactcagtaagaaaagaagtaacacataca
tttaattctcgagaaagtgattggggttttacgtcctttatgcctttaattgatctatat
gatcctagtaaaggttatattgtgaacgatcaatgcatcattgaagctgaggttgctgtg
cgtaaaattgtggattactggaactacgactcaaaaaaggagactggttatgttggtctc
aagaatcaaggtgccacttgttacatgaattcgctgctccagacactctaccatattccc
tactttaggaaggctgtgtaccatatgcctactgtcgatacaccttcagggagcattcct
ttagctttgcaaagtcttttctacagacttcagcatggtgacaatagtatttccacaaaa
gagctgactaaatcttttggatgggattcctatgagtcgtttatgcagcatgatgtccaa
gagttgaatcgggttctatgtgaaaagctggaagataaaatgaagggaactattgtggaa
ggaacaatacaaaaattatttgaaggtcaccatatgaattatattgagtgcattggtgtt
gactacaaatctactagaaaagagtcattctatgatctcgcacttgatgtcaagggctgc
tcggatgtttatgcatcttttgataagtatgtagctgtagagatgttggatggtgataat
aagtatcaatctgaaaaatacggcctgcaggatgccaagaaagggatgctttttattgat
ttccctccagttctgcaacttcaactgaagcggtttgaatatgatcatgcacgggatata
atggttaagataaacgaccgttatgagttcccacttcagttggatcttgacagagatgac
gggaaatatctctctccagaagctgataggagtgtgcgcaacctctatactcttcacagt
gtgctagttcacagtggtggagttagtggtggacactactatgccttcatccgccctacc
ctttctaatcaatggtacaagttcgatgatgaacgagtgacaaaagaagacctgaaacgg
gcgttggaggagcagtatggtggcgaggaagagctcccccatactaatcctggactgaat
atgaacccacttaaatttaccaagtattcaaatgcttacatgcttgtgtacatacgtgaa
agtgacaaagagaaaattgtttgtgatttggaagagacagacatcaatgaagaccttaag
actaggctaagaaaggaagacgaagacaaagagaacaagaaaaaagagaaagctgaggct
cacatgttcaccacatttaaggtggccagagatcatgatttggcagcacaaattggacga
gacttgttttttgatctcgtggattatgaaaaaattcatcctatccgtgtacttaaagac
atgccattcaaccaggttaaggaggagttctcgaaagaatttggtatccccgtccactcc
cagagattttggtggtggtctaagcggcagaacaacacctacaggcccactcggccatta
actcaacaggaggaatcatatactgttggacagcttaaagatgcagcaattcgaatgaac
agttctgaattgaggttgtacttggaggttgtacaggagaatcatttgactcttgcttcg
aggacaaaggatgatattttgcttttcttcaagctctatgaccctgaaaaagaagaacta
agatatgttgggaatcttctcttgaaagcatcaagtaagccatctgatatagtgccaaaa
ttgaacgagatagcaggatttcagcacgatgaagacattgagttgtacgaggaaataaaa
tttgagccaaatattatgtgtgaaccagttgactgtgatgtttccttcagtttaaaccag
attgcagatggagacatattgtgctaccaaaaacgttgttctctggaccaacaccgacat
cccaatgtatcttctttctttgaatatgtccataatagacaggttgtgcacttcagattg
cttgaaaagccaaaacaagacgacttctctctagaactatcaaaacgttccacatatgat
gatgttgttgagaaagttgcacaacatcttggtatggatgatccttcaaaactccgcctt
actcagcacatccctcatttacagcaaccgaaacatcaatacatcaagtatagaagtatt
gatcatctttcggacatgttacttttacgtaaccccaatcagatgtctgacattttatat
tatgaaatactggacattcctttgccagaactgcaaggtctgataacattgagagttgct
tttcaccaagctacacctaatgaggtgctgtttcacattatacgattgccaaagggtagc
acttattctgatttgatcgacgacttaaaatcaaaggttcagctatctcgaagtgatgct
gagcttaggctatttcaggtcaacaataacaagatatggaaggtgtacctgcctactgag
aaaatagatgcagttcatgatccaaatgtacctcttcatgttgaggagattcctgaagta
gagaaaagtgccggtccgcgagaccgtttggttcatgtcgtccacttcttcaaagataac
cagcacattcaatactatggagtgccattcttcttccttattcgtgagggtgaagctttg
tcagatatcaaagtgcgcattcaaaagaaatttgaggttccagacgagcagtttcttaag
tggaaatttgcttatgttgcctacaatcgcccggattaccttcaagattcagatattgtg
ttgagccgattccagcagaaaaacatttatggaccatgggaacaatccctaggactggag
cactcagacatgcccaccaaaagggccaatcagaatcgccattcttttgaaaagccggtg
aagatctacaactaa
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