KEGG   Aegilops tauschii (wheat D): 109741716
Entry
109741716         CDS       T04345                                 
Name
(RefSeq) splicing factor U2af large subunit B isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109741716
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ats03041]
    109741716
Spliceosome [BR:ats03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109741716
 Complex B
    109741716
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded DUF4154
Other DBs
NCBI-GeneID: 109741716
NCBI-ProteinID: XP_020156370
LinkDB
Position
4D:complement(133948459..133953949)
AA seq 548 aa
MADDNGGGGDDYVSEAVRPEGDTHTREEGLSKSRDRDREKDKDKERHRDRDRDRGRDRDR
GRDRDLDKDRDRDKDRDRHQRHHRDKREHRDRPDDHDRHRSRDSERRRDRERDGYRRHRS
RSRSRSRGRDDHRSRSHSKSKRVSGFDLGPTAQSVLPQFPAIPTPSQLPGSSIPGMFPNM
LPFAVGQFNPLVMQPQAMTQQHIFPQATRHARRVYVGGLPPSANEQSVAIYFNQVMAAIG
GNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSL
AAALGPSQPSSNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG
FDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGSAQPRPEQE
NILLQAQQQVQLQKLVYQVGALPTKVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKYGN
LVKVVIPRPHPSGEPVSGVGKVFLEYADVDGSTKAKTAMHGRKFGGNPVVAVFYPENKFA
DEDYDAAA
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggccgacgacaacggcggcggcggcgacgactacgtcagcgaggccgtccgccccgag
ggtgatacacatacgcgtgaagagggattgtcaaaatccagggatagagacagagaaaaa
gacaaggataaggagcgccatagggaccgtgacagagatagaggaagagacagagatcgg
ggtcgggacagggatctagacaaggatcgggacagggacaaggatcgggatcgtcaccaa
aggcatcaccgtgacaaaagggagcaccgagaccgtcctgatgatcatgatcgtcacaga
agccgtgattctgaaaggagaagggaccgcgagagagatggatatcgcaggcatcgctct
cgttcacggtctcgttcaaggggcagggatgatcacagatctcgatctcattcaaaaagc
aagcgagtcagtggattcgacctgggaccaacagcacaatccgtacttcctcagttccct
gccattccaaccccaagtcagttaccgggctcttctattcctggaatgttcccgaacatg
ctcccttttgctgttggacagttcaatcccctcgtcatgcagccacaagccatgactcaa
cagcatatttttcctcaggctactcggcatgctcggcgtgtttatgtcggtggccttccc
ccatctgctaatgaacagtctgttgcaatatactttaatcaagtcatggctgctattgga
ggaaacactgctggtccaggtgatgctgttcttaatgtgtacataaaccatgacaagaaa
ttcgcttttgtggagatgaggtctgtggaggaagcaagcaatgcaatggcactggatggc
attttgtttgaaggtgcaccagtgaaggttagaagaccaacagactataacccttctctg
gcagctgccctgggcccaagccagccaagctccaatttgaatcttgctgcggttggccta
acaccaggttcagccggagggttagaaggcccggaccgtatttttgtgggtggtctcccc
tattacttcacagaggctcaagttcgggagctgcttgaatcatttgggcctcttcgagga
tttgatcttgtgaaagatagggaaactggtaactcaaagggctatgcgttctgtgtctac
caggacctcaatgtcactgacatagcctgcgctgctctaaatggtatcaagatgggagac
aaaactcttacggtcagacgagcaaaccagggctcagcccaacctagaccagagcaggaa
aatatcctgttgcaggcacagcaacaggtgcagttacagaaacttgtgtatcaagttgga
gcgctccctacaaaggttgtatgcctgacccaggtagttactgctgatgaattaaaagat
gatgaagaatatgaggacattatggaggacatgaggttggaagctgggaaatatggtaac
ttggtgaaagttgtcatcccacgtcctcatccgagtggagagccagtttctggagttgga
aaggtgttcttagagtatgcagatgttgatggttccaccaaagcaaagacggcgatgcac
ggaaggaaattcggtggaaacccagttgttgcggtcttctaccccgagaacaagtttgct
gatgaggactatgacgcggcagcataa

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