Aegilops tauschii (wheat D): 109741964
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Entry
109741964 CDS
T04345
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3 isoform X2
KO
K14829
pre-rRNA-processing protein IPI3
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ats03009
]
109741964
Ribosome biogenesis [BR:
ats03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
109741964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WDR55
EIF3I
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_LRRK2
Beta-prop_RIG_1st
WDR54
Beta-prop_IFT122_1st
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
109741964
NCBI-ProteinID:
XP_020156643
UniProt:
A0A453SBJ7
LinkDB
All DBs
Position
7D:458956957..458962291
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AA seq
417 aa
AA seq
DB search
MAPPSQLVLAASSTDAGVAAWDLRTGAEAIRHRPCASRPRAIAAVAGRFLAAAQVAAGNS
APIHYYHWDKPQVAVKSFPAEPIRALIADPEGNYLIGGGVSGDIFFWEVASGELLVRWHA
HYRDVRCLALYDMLLVSASEDGSIKVWDLLTMLDEQSRFEAKTPYLYNFNQHTLPVTDIA
CFHGAIAVSSSEDRTCKIWSLSEGRMLRSISFPAIIDSVEIDPRSHIFYAGGRDGKIYVT
AMGVDVSSQGRDDTSILGILDDHSKAVTSLTSSTDGLLLVSGSEDGNVRVWDTRSQQVTR
KFKHSQGPVTNVLIVTPKRLNLPPLQPLRKVCAASGEVVPRAVILPNPDKDVHIAGNLSS
NLLEQLLDAQQHGSSRLFDSGVSTLNGVPNQQGTEWRSKYLELQDLFVHEVLGDMPS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccgtcgcaactggtgctcgcggcctcctccaccgacgccggcgtggccgcg
tgggacctccgcacgggggccgaggccatccgccaccgcccctgcgcctcccggccacgt
gccatcgctgccgtcgccggccgcttcctcgccgccgcccaggtcgccgccggcaactcc
gcccccatccactactaccactgggacaagccccaggtggctgtgaagagcttccccgcc
gagccaatccgcgcgctcattgctgacccggaggggaactatctcatcggcggcggtgtg
tccggtgacatattcttttgggaggtggctagtggagagctgcttgtccgatggcatgct
cactatcgtgatgttaggtgccttgccctctatgacatgttgcttgtctcggcatccgag
gatgggagcatcaaagtttgggatcttctcacgatgcttgatgagcaatcaaggtttgag
gcaaagacgccatacctatacaactttaatcagcacacacttcctgtaactgatattgct
tgttttcatggagcaattgctgtgtcatcttcagaggaccgcacatgtaaaatatggagt
ctatcagagggcaggatgctgagaagtatttcatttcctgctatcattgattctgtcgaa
attgacccaagaagtcatattttctatgctggtggtagagatggaaagatatatgttact
gctatgggtgttgatgtctcctctcagggccgtgatgatacgtctattctcggtattctg
gatgaccacagcaaggcggtaacgagcttaacatcaagtacagatggccttctactagtc
tctggttcggaggatggtaatgttcgggtttgggatacgagaagtcagcaagtaacccga
aaattcaaacactctcaaggtccagtaactaatgttctcatagtaacacccaaaagatta
aatctgccacctttacaaccattgcggaaagtgtgcgcagcaagtggcgaagttgtacca
cgagctgtaattctgcccaaccctgacaaggatgttcatattgctggaaatctcagctct
aaccttctagagcagctcttggatgcacaacagcacggcagctctaggttatttgattct
ggggtaagcactctcaatggcgtaccaaaccagcaggggacagaatggagaagtaaatac
ctagagttgcaggatctttttgtgcatgaggttcttggtgatatgccatcttaa
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