Aegilops tauschii (wheat D): 109742536
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Entry
109742536 CDS
T04345
Name
(RefSeq) uncharacterized protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109742536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ats03009
]
109742536
Ribosome biogenesis [BR:
ats03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109742536
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Utp12
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_SCAP
DSE1_N
Beta-prop_TEP1_C
NBCH_WD40
WD40_MABP1-WDR62_1st
CFAP251_N
Beta-prop_Aladin
Beta-prop_NOL10_N
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_IFT140_1st
ASA1
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_NWD2_C
PAC11
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
KNTC1_N
PALB2_WD40
Beta-prop_LRRK2
WD_LRWD1
CDtoxinA
PROPPIN
Motif
Other DBs
NCBI-GeneID:
109742536
NCBI-ProteinID:
XP_020157216
UniProt:
A0A453J1F0
LinkDB
All DBs
Position
4:489580156..489586254
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AA seq
940 aa
AA seq
DB search
MVKAYLRYEPALSFGVVASPESNVVYDPSGRRLLAAALDRFAAWDLKRGLPSATFTPSSS
SASLAVSCVASSPAAASASASSVASGHADGSIRLWDTESGACEATLHGHRSAASALRFAP
SGAVLASGSKDCDVILWDVVAQAGLFRLRGHRDQVTDLLFLDSGKKLVTCSKDKFIRVWD
LDTQHCLQIVGGHHSEIWSMDVDPSEKFLVSGSADPELRVFRIRQSAEEGEDWNKWDALK
LFGEIPRQSKERIQTIRFNKDGSLVACQVAGKTADIYRILDETEATRKAKRRLHRKKEKA
SAKAAAAEGNGSVIDPSPAQDSQNPTVVVTDVFKLLQVLRTSKKICSVAFSPSNPPKGCL
ATLSLSLNNNVLETYSVDNEKVSKMYSVEIHGHRSDIRSLALNSEDNLLMSTSHNAVKIW
NPSTGDCLRTVDSGYGLCSAFVPGNRYGLIGTKTGTLEIIDINSGNSIDVIEAHAGSIRS
IVLIPDEDGTVNARGFVTGSADHDVKFWEYQLVQKSDSDTKHLSVTNVRTLKMNDDVLAV
SIGPTGKHIAVALLDCTVKVFFLDTLKFCLSLYGHKLPVLCMDISSDGALIVTGSADKNL
KIWGMDFGDCHKSIFAHTDSVMDVKFVPKTHYMFSVGKDRTVKYWDADKFELLLTLEGHH
AEVWCLAISSRGDFIVTGSHDRSIRRWDRTEEQLFIEEEREKRLEETFEADLDNAVEDRY
GQKDDAPDEGSVGVPGKKTKETVTATDAIIDALDTAEEEEKRLNEQKKLQNTGEGTKSKP
NVIMQGHSPSEYVLNAVSSVRPNDLEQALLSLPFSDALKLMAYLKEWSLIPLKVELVCRV
CLVLLQTHHNQLTTTPAARSILTELKYILYGRVKDCKDTIGFNLAAMDHIKELLTMRSDA
PFRDAKAKLMEIRQEQSKRSDRSDGGEKRKKKKPKPSVQS
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggcctacctccgctacgagccggcgctctccttcggcgtggtcgcctccccg
gagtccaacgtcgtctacgacccctccggccgccgcctcctcgccgccgccctcgaccgc
ttcgccgcctgggacctcaagcgcggcctcccctccgccaccttcaccccctcttcctcc
tccgcgtccctcgccgtctcctgcgtcgcctcctcccccgccgctgcctccgcctccgct
tcctcggttgcgagtggccatgccgatgggagcatcaggctgtgggacaccgagtccggc
gcctgcgaggcgacgctccacggccaccgctctgccgcttctgccctacgcttcgctccc
tctggcgccgtccttgcctccggcagcaaggactgcgatgtcatcctgtgggacgtcgtt
gcgcaggccggcctcttcagactccgtggccaccgtgatcaggtaactgatttactgttc
ctggattcgggtaagaagctggtgacctgctccaaggacaagtttatccgggtctgggac
ctcgacacgcagcactgccttcaaattgtaggtggccaccacagcgagatatggtccatg
gatgttgatcctagcgagaagtttttggtgtctggctctgccgatccggagctccgggtg
tttagaatcaggcaatcagctgaagagggtgaagactggaacaaatgggacgcactcaag
ctgtttggcgagattccgaggcagagcaaagaaagaattcagaccattaggttcaataaa
gatggcagtcttgtggcatgccaggtggcagggaaaactgctgacatctataggattctt
gatgaaacagaggcgacacggaaggccaagaggcggctgcacaggaagaaggagaaggct
tcggcgaaagctgcggcagcggaagggaatggtagcgttatagatccttcgccagctcaa
gactctcagaatcccactgttgtggtcactgatgtatttaagcttctccaagttttgcgg
accagcaagaaaatttgctctgttgcattttctccaagcaatccaccaaaaggctgcctt
gcgaccttgtctttgtctctgaacaataacgtgcttgagacatactcggtggataacgag
aaggtgtctaagatgtactcagttgagatacatgggcatcgttctgacatcaggagtctt
gcgcttaactcagaggataacctcctgatgtcaactagtcacaatgctgttaaaatctgg
aatcctagtacaggtgactgtcttcggaccgttgactctggatatgggttgtgcagtgca
tttgttcctgggaatcggtatggccttatcggtacaaagactggtaccttggagattatt
gatattaatagtgggaactcaattgatgtaatcgaagctcacgctggttccatacgatcg
attgtactcattccagatgaggatggaactgttaatgcacggggttttgtcactggaagt
gctgatcacgatgtcaagttctgggaataccagttagtgcagaaatctgattcggacaca
aagcatctgagtgtaacaaatgtgagaaccttgaaaatgaatgacgatgtccttgcagtg
tccattggtccaactgggaagcatattgctgttgctcttttggattgcacagtgaaggtc
ttctttctggacacactaaagttttgtctttcgctttatgggcacaagcttccagttctc
tgcatggacatatcatccgatggagctctaatagttactggttccgcagacaaaaatctg
aagatttggggtatggattttggtgactgccacaaatctatctttgcccacacagacagt
gtgatggatgttaagttcgttcctaaaactcattacatgttcagtgtggggaaagatcgt
actgtgaagtactgggatgctgataaatttgagcttttgttaacacttgaaggacaccat
gctgaagtttggtgccttgcgattagcagtcgtggtgattttattgtaacaggctctcat
gatcgctctattcggcgttgggatcgtactgaagaacaacttttcattgaggaagagagg
gagaaaagactggaggaaacttttgaggctgatttagacaacgcggttgaagatagatat
gggcagaaagatgatgctcctgacgagggttctgtgggagttcctggtaagaaaacgaaa
gagacagtaactgctactgatgcaattattgacgcacttgacactgccgaggaagaagaa
aaacgtcttaatgagcagaagaagttacaaaacactggggagggaactaaatctaagcct
aatgttataatgcaagggcattcaccatcagaatatgttctgaatgcagtgtcaagtgtt
cgcccaaatgacttggaacaagcccttctgtcattgccattctcagatgcactaaagctt
atggcttacttgaaggagtggtctctaatccctttgaaggttgagcttgtctgtagggtt
tgccttgtgctgcttcaaacgcatcacaaccagttaactactacaccagctgcaagatcc
atactgacagaactgaagtatattctttacggtagagttaaggactgcaaggataccata
ggtttcaatctcgccgcgatggatcatataaaggaactgttgacgatgagatcagatgcg
ccgttccgggacgccaaggcgaagctcatggagatcaggcaggagcagtcgaagcggtcg
gataggtcggatggcggcgagaaaaggaaaaagaagaaacccaagccgtctgtacagagc
tga
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