Aegilops tauschii (wheat D): 109743265
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Entry
109743265 CDS
T04345
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109743265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109743265
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109743265
mRNA degradation factors
5'-3' decay
Decapping complex
109743265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_TEP1_C
DUF445
Motif
Other DBs
NCBI-GeneID:
109743265
NCBI-ProteinID:
XP_020157936
UniProt:
A0A453PG59
LinkDB
All DBs
Position
6:complement(401895030..401903570)
Genome browser
AA seq
1356 aa
AA seq
DB search
MASPAGNPNPNPGNPNPPFEMAMLFRPPPNPAPTAAPMFPGAAGPPPHSGPYSYPPATPP
FHLRPYLHYPQDPQPPMPRPVIPFPMPNPNANPNPGANPMAAAGPNPGARLMQLLGSSGS
GHLESAVSMPPPSSEFAAAQPSPLPAMPSAPPARMLSSTSSKVPRGRLLGGGDKAVHNVD
SRLPGEAQPPQLEVTPITKYTSDPGLVLGRQIAVNRTYIVYGLKLGNIRVLNINTALRSL
LRGHTQRVTDMAFFAEDVHRLASASVDGRIYVWRIDEGPDAENKPQITGKIEVAIQIVGD
AEAYHPRICWHSHKQELLFVGIRNCVLRIDTTKVGRGRDFNAEEPIKCHLDELIDGVRLV
GRHDGDVTDLSISQWMTTRLASGSNDGTVKIWDDRKLAPLSILKPHDGQAVYSVAFLTAP
ERPHHINLITAGPLNREIKIWASTNEEGWLLPSDSETWNCTQTLELVSSLEPKVEEAFFN
QVAVLPQASIILLANAKKNAIYAVHVEYGSDPASTRLDYIADFTVAMPILSLTGTHESQP
DGEQVVQVYCVQTMAIQQYGLELSLCSPPTSDTNSFGRDPAISRVYDTPLEVVGAESSTG
TSVTDSYTVGTSSKQSTFDQTAEFDLKPSAPPLTYTEGDGSVHLQSAPLASNTDLTGSGP
VGNRDKDQSAFDYSTSRITEPVALTRQDTPMPKPVALARQDTPMPKPVALARQDTPMPKD
NFGKDELRDSHSDVQMLPNPRMMFKVGGNATHLITPSEIISGALSAESNQISKSDGAKIQ
DDSISSPRIAEVEAKHVNEGKSNHDLELEAVKEAQVVRENSEKDQNSLEQTVEMISERSV
TTDKYSVEESRSPSDRLVPDHTGAAGENVSNKTIEKPGISDSSVSREQSSSYTKDKVFHP
QASGQSSPSTSAFNSTESSHEPVSSAYPPIESSSEVADMLQQLIAMQKDMQKQLGTIVIA
PIAKEGKRIETSLGRTMEKSIKASIDALWARFLEENTKREKAERERMQQMTTLITSSINK
DLPAMLDKLVKKEVPSLGPVVARAMTPIIEKSLTSIVADAVQKAVGDKVVNQLDKSVTAK
LEATLARQIQMQFHTSVKQTLQDVLRTSFESLLVPAFEQSCKTMFEQVDSAFQKGMSEHA
VAIQQQVEAAHTPLVLTLKETITSASSITQNLTSELLDGHRKILALVTSGNANAQNTNVL
QPNNGPITGPPEVEAPLDPMKELSRLLSEHKFDEAFTVALQRSDVSIVSWLCSQVDLRGL
CTMAPVPLNQGVLLALLQQLAVDIGTETSRKIQWMTDVAMAINPTDQVIAIHVRPIFEQV
YAKLAHHRSLPTTSPLDNSNLRLLMHVINSVLLSYK
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctccagccggaaaccctaatccgaaccccggcaaccccaatccccccttcgag
atggccatgctcttcaggccgcctcccaaccccgcgccgaccgccgcgcccatgttcccc
ggcgccgccggcccgccgccgcactccggcccctactcctaccccccggccacccctccc
ttccacctccgcccctacctccactacccgcaggatccccagccccccatgccccgcccg
gtcatccccttccccatgcccaacccgaacgcgaaccccaacccgggcgctaaccccatg
gccgccgcgggccccaaccccggcgcccgcctcatgcagctgctcggcagctccggctcg
ggccacctcgagtccgcggtatccatgcccccgccgtcgtcggagttcgccgccgcgcag
ccgtcgccgctcccggcgatgccatccgcgccgccggcgaggatgctcagcagcaccagc
agcaaggtgcccagaggtcggcttctgggtggcggggacaaggcggtgcacaacgttgac
tcgaggctgcctggggaggcgcagccgccacagctggaggtgacgccgatcaccaagtac
acgtcagacccaggtcttgtgctgggcaggcagatcgctgtgaaccggacgtacatcgtc
tatgggctcaagctggggaacatccgtgtgctaaacatcaacaccgcgcttcggtcactg
ctccgtggccatacacagagggtcacggacatggctttcttcgctgaggacgtccatcgt
ttagcaagcgcaagtgttgatggacggatatacgtgtggaggattgatgaggggcccgat
gcagaaaataaaccacaaattacaggaaagatagaagttgccatacaaattgtaggtgat
gccgaagcttaccatccaaggatatgttggcactctcataagcaagaacttctgtttgtt
ggaatcagaaactgtgtcttaagaatagacacaactaaagtgggaaggggaagagacttt
aatgctgaagaacctatcaaatgtcatcttgacgagcttattgatggtgtacgcttggtt
ggtaggcatgacggtgatgtgacagatttgtccatatctcagtggatgactacccgactg
gcttcaggatcaaatgatggcacggtaaagatttgggacgatcgcaagttagcgcctcta
tcgattctaaagccacatgatggtcaagctgtttactcagttgcctttcttacagcacct
gagcgcccgcatcatataaatctcatcactgctggtcctctaaaccgagaaattaaaatt
tgggcttctactaatgaagaaggttggttgttgccaagcgactctgagacttggaattgc
acgcagaccctggaacttgttagttctctggaacctaaagtcgaggaggcatttttcaat
caagttgcagtgctgcctcaagcaagcattatcttacttgcgaatgcgaagaagaatgct
atttacgctgtgcatgttgagtatggctcagaccccgcttctacccgcttggattatatc
gcagattttacagtcgcgatgcctattttaagtcttactggtacacatgaaagccaacct
gatggtgagcaggtagttcaagtctattgtgtccaaacaatggccatccagcagtatggg
ctggagttatcactttgttcgcctcctacatctgatactaactcatttggaagagaccct
gctatttcacgtgtttatgatacacctctggaagtggtaggagcagagtcatccacggga
actagcgttacagattcttataccgtcggtacttcgagtaaacaatcaacttttgatcag
actgcagagtttgatcttaagccatcagctccaccacttacatacacagaaggtgatggt
tctgtgcatcttcagtctgcccctcttgcatcaaacactgatcttactggatcaggacca
gtaggcaaccgtgacaaagaccaatcagcttttgattattcgacaagccgaatcactgag
ccagttgccttgactaggcaagacacacccatgccaaaaccagttgccctcgctaggcaa
gatacacccatgccaaaaccagttgcccttgctaggcaagatacacccatgccaaaggac
aattttggaaaggatgaattaagagacagccacagtgatgttcagatgctcccaaatcct
cgcatgatgtttaaggtaggaggaaatgccactcatctcataactccatctgaaattata
tcaggtgctctgtctgctgaaagcaatcagatctctaaatctgatggtgcaaaaatccag
gatgactctattagtagccctcggattgcagaagtggaagcaaaacatgtcaatgagggt
aaatctaatcatgatttggaacttgaagctgtcaaggaagctcaagttgtccgtgagaac
tcagagaaagatcaaaattcgttggagcaaactgttgaaatgatcagtgagcgttcagta
acaactgataagtatagcgtggaagaatcacggtcaccgtctgatagactggtccctgac
catactggtgctgctggagaaaatgtttcaaacaaaaccatagaaaaacctggcataagt
gactcctctgtgtctagggagcaatcatcttcatatacaaaggacaaggtttttcatcct
caagcatctggtcagtcatcaccttctacaagcgcatttaactcaactgagtcttcacat
gaacctgtcagcagtgcataccctcctattgaatcctcttcagaagttgccgatatgctg
caacagctaatagccatgcagaaggatatgcagaagcagctaggtactatcgttattgct
cccattgcgaaggaaggcaaaagaattgaaacatcactaggccgtacaatggagaaatct
atcaaggctagcattgatgccttgtgggctcgtttcctggaggagaacacaaaacgtgag
aaggctgaaagggaacgaatgcagcaaatgaccactctcatcacaagctcaataaacaag
gaccttcctgctatgttggataagttagtaaagaaagaagttccttcacttggacctgtt
gttgcacgggcaatgacacctattattgagaagtccttaacctctatagttgctgatgca
gttcagaaagcggtgggtgacaaggtggtgaatcagctggacaaatctgttactgcaaaa
cttgaagctacacttgctaggcaaatccaaatgcaatttcatacatctgtaaaacagact
cttcaggatgttttacgcactagctttgaatcattgcttgttccagcatttgaacaatca
tgcaagacaatgtttgagcaagtagacagtgcattccagaaaggaatgtctgagcatgct
gttgctattcagcagcaggttgaggcagcacatactccattggtgcttactttaaaggaa
actatcacttctgcgtcctcaatcacccagaatctcacatcagagttacttgatgggcat
cgcaaaattttggcgctggttacatcaggcaacgccaatgcgcaaaatacaaatgttctg
cagcccaacaatggtcctatcactggcccgccagaggttgaggcaccattagacccgatg
aaggagctgtcaagactgctatctgaacacaaatttgacgaggcttttacagtagcactt
caaagaagtgacgtgtcaattgtgtcttggttatgctctcaggttgatttgcgtggatta
tgtacaatggccccagtccctctgaaccagggagtccttctagccctactccagcagcta
gcagttgatattggcaccgagacatcccggaaaattcagtggatgacagatgttgccatg
gcgatcaatccgacagaccaagtcatcgccatacatgtaaggcccatcttcgagcaagtc
tacgccaagttggctcaccaccggtcgctccccaccaccagtccattggataatagcaat
cttcgcttgcttatgcatgtcatcaactcagttctgcttagctacaagtga
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