Aegilops tauschii (wheat D): 109743354
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Entry
109743354 CDS
T04345
Name
(RefSeq) exosome complex component RRP41 homolog
KO
K11600
exosome complex component RRP41
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109743354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109743354
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109743354
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
109743354
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
RF-1
Motif
Other DBs
NCBI-GeneID:
109743354
NCBI-ProteinID:
XP_020158037
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All DBs
Position
1:complement(477864880..477868515)
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AA seq
242 aa
AA seq
DB search
MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVSRADGSALFEMGNTRVIAAVYGPREIQNRS
QQQNRKEALVRCEYRMAEFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPHSQID
IFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGG
ADVTVGILAKMDKVTLLQMDAKLPMDTFETVMDLATEGCKAIATYIREVLLENTKQLECQ
RG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggagtacgtcaaccctctcaccggcttccgcgtcgacggccgccgccccaacgagatg
cggcagctcaagggcgaggtcggcgtcgtctccagggccgacggctcggcgctcttcgag
atgggcaacaccagggtcatcgccgcggtctacggacctcgagagatccaaaacaggagt
cagcaacaaaatcgtaaagaggctttggtgcgttgtgagtatagaatggcagaatttagc
actggggatcgaaggagaaagccaaaaggtgacaggcgatcaacagaaatttctcttgtt
attcgacaaacaatggaggcaagcatattaacacatttaatgccacactcacagattgac
atatttgtccaagttcttcaagctgatggtggaaccaggtccgcatgcatcaatgctgca
acactagcacttgcagatgctgggattccaatgcgagacatagtcacatcttgcagtgct
gggtacctgtgttctactcctttgcttgatctgaactatatagaagacagcgctggaggc
gcggatgtcaccgttggcattcttgcaaagatggacaaagtgactcttctgcagatggac
gcgaaactaccaatggatacatttgagactgtgatggaccttgcaactgaagggtgcaaa
gcgatcgcaacctacatccgagaggtgctattggagaacacgaagcagctggagtgtcag
cgaggctag
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