Aegilops tauschii (wheat D): 109743955
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Entry
109743955 CDS
T04345
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic isoform X1
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109743955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ats03400
]
109743955
Enzymes [BR:
ats01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
109743955
DNA repair and recombination proteins [BR:
ats03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
109743955
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Exo_endo_phos_2
Rho_N
Motif
Other DBs
NCBI-GeneID:
109743955
NCBI-ProteinID:
XP_020158638
UniProt:
A0A453FQU3
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Position
3
Genome browser
AA seq
517 aa
AA seq
DB search
MQLLLRCGSLLRLYECSGGLPRTNYSSRKLVLPILNMMSERTRITYSRRAVSRNSEIKKD
EQTVIEKEDDTESTLEIERIRGDPSMLQSMTVKELKELTRRMGVAARGNKKDLVSALMES
LGEEVIGKEGASTIEQIGPSEVPSKRKSASSVVVEQKLETSEVISATPSKRSRTKQKSIK
GTTPEENPVTTVKINKTSHKKETVVANGAIAKAGLGLNVDGAEPWTVLVHKKPQAEWIPY
NPKVMRPPPLSKDTRALKILSWNVNGLKALVKNRGFSVHELAQREDFDVLCLQETKIQEK
DVDVIKESLLEGYTNSFWTCSVSKLGYSGTAIISRVKPLSIKYGLGVPDHDTEGRIVTVE
FDDFYLLTAYVPNSGDGLKRLTYRVTEWDPCLGNYMKELEKSKPVILTGDLNCAHQEIDI
HDPAGNSRSAGFTKEERKSFETNFLSKGFVDTFRKQHPDVVGYSYWGYRHNCRKTNRGWR
LDYFLVSESIAERVHDSYILPDVSASDHSPLGLILKL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgctcctgcgctgtggctctctcctccgtctctacgagtgtagcggtgggctt
ccaagaacaaattacagttccagaaaattagtgcttccaatactaaacatgatgagtgag
aggacgcggattacctattcacgtagagctgtctctaggaacagtgagatcaagaaagat
gaacaaacagtcatagaaaaggaagatgacactgaaagcacattggagatagagcgaatc
aggggtgaccctagtatgctccaatccatgacagtgaaagaactcaaggaactcacaagg
aggatgggagttgctgcgagaggtaacaagaaagatttggtatcagctctgatggaatct
ctgggtgaggaagtaattggtaaagagggcgcatcaaccattgagcagattggcccatca
gaagtaccttcaaaaagaaaaagtgcctcttcagtagtggttgaacaaaagctagaaact
tctgaagttatttccgcaactcctagcaagagaagtagaaccaagcagaaatcaattaag
ggcaccactccggaggagaaccctgtgactactgtcaagataaataaaacatcgcacaag
aaggaaacagttgttgccaatggtgctattgcaaaggcggggttgggtcttaatgtggat
ggtgcagagccttggactgtactcgtacacaagaagccacaggctgagtggattccatac
aatcctaaggtcatgaggcctccaccccttagcaaggatacaagggcgctaaagattcta
tcatggaatgtcaatggactgaaagctctagtaaaaaataggggcttctccgttcatgag
ttagcacagagggaggattttgatgtgctatgcctgcaagaaacgaaaattcaggagaaa
gatgttgacgtcatcaaggaaagtctacttgaagggtataccaatagtttctggacatgt
agtgtgtcaaagcttggctattcagggactgccataatttcacgggtgaaaccactttct
atcaagtatgggcttggtgtaccagaccatgatacagaagggaggattgtgacggtggaa
tttgatgatttttacttgctaaccgcttatgtgccaaattccggtgatggtctcaaaaga
ttgacttacagagtcacagagtgggatccatgccttggtaactacatgaaagaattggaa
aaatcgaaacctgtcatactaactggtgatcttaactgtgcgcatcaggagattgatata
catgatcctgctggaaatagtagaagtgccggcttcacaaaagaagaaaggaaatcgttc
gagactaattttctgtccaaagggttcgtggatacgtttcggaaacagcaccctgatgtt
gttggatatagctactggggctataggcataattgccggaagactaatagaggttggcgc
ctggattacttcctcgtgtcggagtccatcgcagaaagagtccacgattcatacatcctc
ccagacgtttctgccagtgaccacagcccactcggcctcatactgaagctctag
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