Aegilops tauschii (wheat D): 109744095
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Entry
109744095 CDS
T04345
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 45
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109744095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ats03041
]
109744095
Enzymes [BR:
ats01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109744095
Spliceosome [BR:
ats03041
]
Complex A
U2 snRNP components
U2 related factors
109744095
Complex B
109744095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
109744095
NCBI-ProteinID:
XP_020158782
LinkDB
All DBs
Position
7:374267750..374272300
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AA seq
1058 aa
AA seq
DB search
MSSGDDDRVTFSKHHHRDKDKDRDHSSSRRHRDKDRPSSRHHRDDRDGERERDRDRDRHH
RDKERDREERKARERAEKEREKEEKREKEREREREEREMEKERERARRREERDREKEKSR
RREAVDEENEDRDRDRKRRRRSLHRHHHRDVEPEETPLSREEEEDAEEVERRRQKKEEDM
EAEQQRLDDEMERRRRRVKEWQEKKRREQQQEDGASGGAAAIEADGGGKSGKKWTLDGEE
SDEEDVKKLEENAGTGAMDVDLPNMDNGSNSGAGLEEDEIDPLDAFMDSMVLPVVAKLES
ATTATESVLADNAGGLNDKGVKDATSNEDKKRQMMAIGRIMQGDDSDSDYDDANNGEAGS
DDEDDAEFIKRVKKTKAEKLVIVDHSKIDYQPFRKNFYIEVKDIKNMPAEEAAAYRKLLE
LKVHGKDVPKPIKTWIQSGLTSKLLDTIKKLGFEKPMPIQAQALPVIMSGRDCIGVAKTG
SGKTLAFVLPMLRHVKDQPPVVPGDGPIGLIMAPTRELVVQIYSDIKKFSKVLGINCVPI
YGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVLDEADRMFDMGF
EPQITRIVQNTRPDRQTVLFSATFPRQVEILARKVLTKPVEIQMGGRSVVNKDITQLVEV
RPESERFFRLLELLGEWFANGKILVFVQSQDKCDSLLKELFQHGYPCLSLHGGKDQNDRE
STLADFKSNVCSLLIATSVAARGLDVKDLELVVNYDVTNHYEDYVHRVGRTGRAGRKGCA
VTFISEEEERYAPDLVKALELSEQAVPEDLKALADRFMSKVKQGTEQAHGTGYGGSGFKF
NEEEEEARKSAKRAQAREYGYEEDKSDSDSDDEGGVRKQGGDVAAQAIAAAQAAAALAAA
RATSNAQQQVPATTAGSLLPLPVAPNQQNNEATQRALDAAYNLQKNLARIQAHAVPEHYE
AELEINDFPQNARWKITHKETLVPIQEWTGAAITTRGTFIPQGKIVGANERKLYLFIEGP
NESSVKKAKAELKRVLEDCANQALNLPGSAQTGKYSVL
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccggcgacgatgaccgcgtcaccttctccaagcaccaccaccgggataaggac
aaggaccgcgaccactcctcctctcgccgccaccgcgacaaggaccgcccctcctctcgc
caccaccgcgacgacagggacggtgagcgggagcgggaccgagatcgcgaccgccaccac
agagacaaggagcgggatcgagaggagcggaaggcgcgggagcgggcggagaaggagcgc
gagaaggaggagaagagggagaaggaaagggagagggagagggaggagagggagatggag
aaggagagagagcgggcgcgtcgtcgcgaggagcgggatagggagaaggagaagtcgagg
aggcgggaggcggtcgatgaggagaacgaagatcgtgaccgtgaccgcaagcgccgccgc
cggtccttgcaccggcaccaccaccgtgatgtggagccagaggagacaccgctgtcaagg
gaggaggaggaggatgcagaggaggtggagagacggcggcagaagaaggaggaagacatg
gaggctgagcagcagcggcttgatgacgagatggagcggcgccgccgccgtgttaaggag
tggcaggagaagaagcgccgtgagcagcagcaggaggatggtgccagtggtggtgcagct
gccattgaggctgatggtggaggcaagtctgggaagaagtggactttggatggtgaggag
tcggatgaggaggatgtgaagaagttggaggagaatgctggcactggtgccatggatgtt
gacctaccaaacatggataatggcagtaacagtggggctggtttggaagaggatgagatt
gatcccctcgacgcgtttatggactctatggtgttgccagtggttgcaaagctcgagagt
gccacaacagcgacggagagcgtgcttgctgacaatgcaggtggtttgaatgacaagggt
gtgaaggatgccacaagtaatgaggataagaaaagacagatgatggcaattgggagaatt
atgcaaggggatgactctgactcagattatgatgatgctaataatggcgaggctggatca
gatgatgaggatgatgcagagttcataaaacgtgtcaagaagacgaaggcagagaagttg
gttattgttgaccattccaagattgattaccaaccattccggaagaatttctatattgag
gtgaaagacataaaaaatatgccagccgaggaagcggcggcctaccggaagctgttggag
ctcaaggtgcacgggaaagacgttccgaagccaataaagacatggatccagagtggtctg
acaagtaagctacttgacactatcaagaagcttggttttgagaaaccgatgcctatacaa
gcacaggcgttgccagtcataatgagtggacgtgattgtataggggttgcaaagactgga
tctgggaagactctagcatttgtcttgcccatgctgaggcatgtcaaagatcagccgcct
gttgtgcctggggatggccctattgggcttattatggctcctacgagagagcttgtggtg
caaatatattcagacataaaaaagttctccaaggtgcttggcatcaactgtgttcctata
tacggaggttctggggttgcccagcagatcagtgaactgaagaggggtgctgaaattgtt
gtttgtacaccaggcaggatgattgatatcctttgcactagcagtggcaagattactaac
cttcgaagagtgactttcttggtgctggatgaagctgataggatgtttgatatgggtttt
gagcctcagattactcgaatcgttcagaacacccgtccggataggcagactgtccttttc
tctgccacttttccacggcaggtggagatactggcacgtaaagtgctgacgaagcctgtt
gagattcagatgggtgggaggagtgtcgtgaacaaagatatcacacaactggtggaagtg
cgaccagaaagcgagaggttctttaggctgttggaattgcttggggagtggtttgcaaac
ggaaaaattcttgtttttgtacagtcgcaagataagtgtgattctctactgaaagagctg
ttccagcacggatacccatgtttgtctctacatggtggaaaggatcaaaatgaccgtgaa
tcaactcttgctgatttcaagagtaatgtatgcagcttgctgattgctaccagtgttgct
gcaaggggtttagatgtgaaagatcttgagcttgttgtcaactatgatgttactaatcat
tatgaggactatgttcatcgggtcgggcgaacgggtcgcgctggtaggaagggctgtgct
gtgacttttatttctgaggaagaggaacgctatgcaccagaccttgttaaggctttggag
ctatctgaacaggccgttccagaggacctgaaagccttagcggatcgatttatgtcaaag
gtcaagcagggaacagagcaggcccatggaacaggctatggtggaagtggtttcaagttc
aatgaagaagaggaggaagcacggaaatctgcaaaaagggctcaggcaagggaatatgga
tatgaggaggacaagtcagattcagattctgacgatgaaggaggtgtgcgtaaacaggga
ggtgatgttgcagcacaagctattgctgctgctcaagctgccgctgctttggctgctgcc
agggctactagtaatgcccagcagcaagtaccagccacaacggctggctccttgcttcct
ctgccggtcgcacctaaccaacaaaacaatgaagccacacaacgagcacttgatgctgca
tacaacttacagaaaaatttggcaaggatacaggcccatgcagttccagaacactatgaa
gcggagcttgagattaatgatttcccacaaaatgctcgctggaagatcactcacaaagag
acattggttcccattcaggaatggactggagcggcaattactacaaggggaacctttatt
cctcaaggcaaaattgttggtgctaacgagcgcaagctgtacctgtttattgagggcccc
aatgagtcttccgtcaagaaggcgaaagcagaattgaagcgtgtccttgaggattgtgcc
aaccaggcactgaatcttccaggttctgctcaaaccggaaagtattctgttctttga
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