Aegilops tauschii (wheat D): 109745001
Help
Entry
109745001 CDS
T04345
Name
(RefSeq) UV-stimulated scaffold protein A homolog isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
109745001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ats03400
]
109745001
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
109745001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
LRIF1
Motif
Other DBs
NCBI-GeneID:
109745001
NCBI-ProteinID:
XP_020159730
LinkDB
All DBs
Position
3:complement(581461912..581464768)
Genome browser
AA seq
704 aa
AA seq
DB search
MPRASVRPPPSEQGPSSSPSTPAADSSVAALIDRATSTTAPSVDPALLRAIKSSARASHG
AVRDAFRLLLSLMAKPHSHVRLLAFSIVDELFMRSKLFRSLLADALDGFVPLAVGFRTNE
QLPPPAASAATLRKAAIQALERWHHLFGVHYRQLRLAVEYLKSSARIQFPGLRAAVEARA
AREARTQEILTAKVEQLRSTIESIKAEIRSTIQEIRNGLDIIRAEYEKFERYVDDDEEEE
IASMAMRSIRTASLMAGQWVPETQENEAVFDALREAYRLLVSKHFSTIQDWISVLVRVNL
ADNRFRDSALKEFIDVKNEIRAVRGQCNELGLDLDNVRRKKDVQEEDEEDWVEGKIEVPS
PPRVVSTLDVAGSSKDNRKGKRILNGANGDMPICGNRSQEMDPERKKLLSEAPLVSWSSV
LDRWGSNMDAHVNQRGLELESHWGRMDNDAVIPAAKIAELNVHHSVYKEEPVEILPCHAP
LKKGGLCQRRDLKICPFHGPIIPRDARGNPIGKISGSSDAGGDPLEQKVEIREAGGNLIK
TNGGSDSESTQEDQEPSTSMMTNINNDTSDIDGAHDLSKITMEQLAMQASKNVRKRGMDD
KARERAQRARIRQHNEDVLRQSAIASTPHSAAAYDQPSGTLGLRGRRRGKTKEPTLSSML
KKKVTAKDRIAGRLLNGRARDATIREASNTEDMTYREAFPNQWQ
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtgcctccgtccgcccgccgccgtcggagcagggcccgagctcctccccctcc
accccggcggcggattcctccgtcgcggccctcatcgaccgcgccacctccaccacggcc
ccctccgtcgaccccgcgctcctccgcgccatcaagtcctcggcgcgcgcctcccacggc
gccgtccgcgacgccttccgcctcctcctctccctcatggccaagccccactcccacgtg
cggctcctggccttcagcatcgtggacgagctcttcatgcgctccaagctcttccgctcc
ctcctcgccgacgcgctcgacggattcgtcccgctggccgtcggcttccgcaccaacgag
cagctcccgccgcccgccgcctcggcggccacgctccggaaggccgccatccaggcgctc
gagcgctggcaccacctcttcggcgtgcactaccgccagctacgtctcgcggtcgagtac
ctcaagtcgtccgcgcgcatccagttccctggtctccgcgcggccgtcgaggcccgtgcc
gcgcgggaggcacgcacgcaggagatcttgactgccaaggtcgaacagttgcggtccacg
attgaatccataaaggctgaaatccggtccaccatccaagagatccgcaacgggctggac
atcatccgggctgagtatgagaaattcgagcgttatgtggacgatgacgaggaggaggag
attgcttctatggcgatgcggagtatcaggacagcatcgttgatggccgggcagtgggtg
cctgaaactcaggaaaacgaggcggtttttgatgcattgagggaggcgtaccggctcctt
gtatcgaagcatttcagcaccattcaggattggatatctgtgcttgttagggtcaatctt
gcagataatcgcttcagagattctgcgctcaaggaatttatcgatgttaagaatgaaata
cgcgctgtaagaggccagtgcaatgagcttggtcttgatcttgataatgttcgtaggaag
aaggatgttcaggaggaagatgaagaggattgggtggagggaaagattgaagttcctagt
cctcctagagttgtgagcactctagatgttgcaggttccagcaaggacaataggaaggga
aagaggattctgaatggagccaatggtgacatgccaatttgtggtaatagatctcaggag
atggatccggagagaaaaaagctcctttccgaagcccctttggtgtcatggagctctgtc
ttggatcggtggggttcaaatatggatgcacatgtgaaccagagagggcttgagctcgag
agccattgggggaggatggataatgatgctgttatacctgcagcaaagattgcagagtta
aacgttcaccattctgtttataaagaagagccagttgagatactaccatgtcatgcacct
ctgaagaaaggaggtctttgccagagaagggatctcaagatatgcccttttcatgggccc
atcatcccacgtgatgcaagaggaaatccaattgggaaaattagtggcagttctgatgcg
ggaggcgatccacttgagcagaaagtagaaattcgtgaggcaggaggaaatctgataaag
acaaatggaggtagtgatagtgaaagtacacaggaggatcaggagccctctacttcaatg
atgacaaacataaataatgacaccagcgacattgacggagcgcatgatttgagtaaaatt
acaatggaacagttggcgatgcaagcaagtaagaatgttcggaaaaggggtatggacgac
aaagcacgcgaaagagcccagcgtgcgagaatccgccagcacaatgaagatgttctgcgg
caatcggctattgcttcaacaccccactcagcggcagcatatgaccagccttctggaaca
ttgggcctacgtggtcgacgtcgaggtaagacaaaggaacctacactatcatcaatgctg
aagaagaaagttactgcaaaagataggattgcagggaggcttctaaatggtcgtgctagg
gacgcaacaataagagaagcttctaatactgaggatatgacctacagggaagcattccca
aatcagtggcagtga
DBGET
integrated database retrieval system
