KEGG   Aegilops tauschii (wheat D): 109745361
Entry
109745361         CDS       T04345                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
  KO
K14962  COMPASS component SWD2
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109745361
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ats03019]
    109745361
   03036 Chromosome and associated proteins [BR:ats03036]
    109745361
Messenger RNA biogenesis [BR:ats03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     109745361
Chromosome and associated proteins [BR:ats03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     109745361
    COMPASS/SET1 complex (yeast)
     109745361
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I WDR55 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 PQQ_3 eIF2A WD40_MABP1-WDR62_1st Beta-prop_NWD2_C WD40_RFWD3 WD_LRWD1 Beta-prop_RIG_1st Beta-prop_IFT122_2nd AC_1
Other DBs
NCBI-GeneID: 109745361
NCBI-ProteinID: XP_020160067
LinkDB
Position
1D:455845617..455855230
AA seq 320 aa
MAATLPQLDDGVVRGMAIGAVFTDYAGKISCLDFHRKEDLLVTSSEDDSIRLYNTTSATL
SKTTYHKKHGADRVCFTHHPSSILCSSRYNVESGESLRYLSLYDNRCLRYFKGHKDRVVS
LCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPSVAYDQQGLVFAVAMEGGAIK
LFDSRSYDKGPFDTFLVGGDTAEVSDIKFSNDGKSVLLTTTNNHIYVLDAYGGEKKCGFS
LEPSRNIATEAAFTPDGQYVISGSGDGTLHAWNINTVQEIACWNSHIGPITALKWAPRRA
MFATASTALTFWIPNESSSS
NT seq 963 nt   +upstreamnt  +downstreamnt
atggcggccacgctgccgcagctggacgacggcgtcgtccgcggcatggccatcggcgcg
gtcttcaccgactacgccgggaagataagctgcctcgatttccaccgcaaggaggacctc
ctcgtcacctccagcgaggacgactccattcgcctatacaacaccaccagcgccacgttg
tcgaagacaacttatcataaaaaacatggtgctgaccgtgtctgttttactcatcatccg
agttccatattatgttcatcaagatacaatgtggagtcaggagaatcacttcgttacctg
tcattgtatgacaaccgttgcttgagatatttcaaaggacacaaagacagggttgtttca
ctatgtatgtcacctgtcaatgatagctttatgtcggggtcacttgatcacagtgtcaga
atatgggatcttcgtgtaaatgcttgtcagggtatactacgtctgcgtggtaggccttct
gttgcatatgatcagcagggacttgtttttgctgtagcaatggagggaggtgctattaag
ctgttcgattctcggtcatatgacaagggtccatttgacactttcttggttggtggagat
acggctgaagtgtctgacattaaattcagcaacgatggcaagtctgtgcttttgactaca
actaacaaccatatatatgttctggatgcatatggaggggagaagaagtgtggcttcagt
ttggagccatctcgcaacatagcaactgaagctgctttcactccagatggtcaatatgta
atttcaggctctggtgatggtaccttgcatgcttggaacatcaatacagtacaggagatt
gcctgttggaacagtcatattggtcctatcactgctttgaaatgggcccctcgtcgagct
atgttcgcaactgcatcaaccgcactaactttctggattcccaacgagtccagttcgagt
tag

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