Aegilops tauschii (wheat D): 109745850
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Entry
109745850 CDS
T04345
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109745850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ats03041
]
109745850
Spliceosome [BR:
ats03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
109745850
Complex C
U4/U6.U5 tri-SnRNP related factors
109745850
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
109745850
NCBI-ProteinID:
XP_020160550
UniProt:
A0A452Y4X8
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Position
1:122515475..122519236
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AA seq
425 aa
AA seq
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MEIQTSGKPIDMLMEKVLCMNILSSDYFKELYQMKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAIGFLYLRYVADPKILWTWYEPYLK
DDEEFSPGSNGRMTTMGVYVRDLILGQYYFDSILPRVPVPVVRQVTTNLEKMKLPTKLSG
VTGDSRHGSEDTARRPSSVKASLSVSFGQRAPHRASTRDSSLVRRTVTQDDHRRSSSPFR
RSVSREGPYNDRQRSTVWPYNDRSSHDREGNRLSCDRDTGRSSHDRDTGRSSRHRERDRS
SHDRERDYDRDSRDCDYYRSRHSEERRDYRSECDNSRHRRSSSCHRSRSRSRSRSRSRSR
SKNEHRSSPFGDTSKEKAAAASSNLAKLKDLYGDVTEKKDDGDARRLHHDSCAEEVIRLG
GPRWR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggagatacagacttcagggaagcccattgatatgctgatggagaaggttctctgtatg
aatattctttcttctgattacttcaaggagctctaccagatgaagacctatcatgaggtc
attgacgagatctacaaccaagttgatcatgtggagccttggatgactggcaattgcagg
ggtccttccactgcattttgtctcctctacaagttcttcacaatgaagcttactgtgaaa
cagatgcatggtttgttgaagcatcctgactccccatacattagagctataggatttttg
tatcttcggtatgttgcagatccaaagatcctatggacatggtatgagccctacttgaag
gatgatgaggaattctcccctggatctaatggtcgcatgacaaccatgggtgtatatgtg
cgtgatcttatacttggacagtactactttgatagtatccttccaagagttcctgttcca
gtagttcgtcaagtaacaaccaatcttgagaagatgaagctgcctaccaagctttctggg
gtgactggagacagtcgccacggatcagaggacactgcccgtcgcccctcttctgttaaa
gcttctctgtcggtttcttttggacagcgtgcgccacaccgtgcttccacacgggattct
tccctagtgcggcgaacagtcacccaagatgatcatcggagatcatcttcaccatttcgt
cgcagtgtaagtcgggaggggccttacaatgaccgacagagaagcacggtgtggccttac
aatgaccgttcaagtcacgaccgagaaggtaaccgtttaagctgtgaccgagatactggc
cgctcaagccatgaccgagatactggccgttcaagccgtcaccgagagcgtgatcgttca
agccatgacagagagcgtgattatgaccgtgacagcagggattgtgactattacaggtcc
aggcattcagaagaaagaagggattaccgaagcgagtgtgacaacagtagacacagacgc
tccagctcatgtcataggagcagaagccggagtcgtagcaggagcaggagccggagtcgg
agcaagaatgagcatcgatctagtccatttggggatacaagcaaagagaaggctgctgct
gcctcgagtaacctagctaagctgaaagacctgtacggcgacgtaactgagaagaaggat
gacggtgatgccaggcggcttcaccatgattcatgtgccgaggaggttattaggctggga
ggccctaggtggagataa
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