KEGG   Aegilops tauschii (wheat D): 109746565
Entry
109746565         CDS       T04345                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats04142  Lysosome biogenesis
ats04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ats00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    109746565
   04148 Efferocytosis
    109746565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ats04131]
    109746565
Membrane trafficking [BR:ats04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    109746565
SSDB
Motif
Pfam: TPR_Vps41 Beta-prop_Vps41 zf-RING_Vps41 Clathrin Beta-prop_WDR5 Beta-prop_IFT122_1st VPS18_solenoid_2nd WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 zf_RING_Vps8_fungal WD40_Prp19 Beta-prop_WDR3_2nd Beta-prop_THOC3 Vps39_1 zf_RING_Vps8 zf-RING_2 WD40 WDR55 VPS18_RING_C TPR_YpiA Beta-prop_ACSF4 Beta-prop_TEP1_2nd Beta-prop_HPS5 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 109746565
NCBI-ProteinID: XP_020161275
UniProt: A0A453DER0
LinkDB
Position
2:complement(628542553..628549750)
AA seq 948 aa
MSSAARRASHPALVNGDGEYGREEEDEEDEEGEEGEGDEPEEEPRLKYQRLGGSVPAILS
TDAAAAIAVTDRAVLLGTHDGTLHILDFQGNQSKEIKAHTATINDISFEDREYIGSCSDD
GTVVISNLFTDEKLKFEYHRPMKAIALDPQYSRSNNRFATGGLAGQVLVLTKKSWVSGYN
KKVLREGEGPIHSMKWRTDLLAWANDAGVKVHDMKTDRGIAFIEKPKGIPRPEVLLPHLV
WQDDTVLVIGWGTSVKVAAIRTDSSQGLNGMQRSISAASSEKYVDIVGSFQTGYHISGIA
PFGDLLVMLAYIPEEDDGDKKISTSVSSRQGTAQRPEIHLVSWKNDVLTTDALPIHGYEH
YKAKDYTLAHAPFSGSSNAGGQWAAGDEPLYYIVSPKDIVVAKPRDTEDHIAWLLQHGWH
EKALAAVEAGQGRTELLDEVGTRYLDHLIIERKYAEAAQLCPKLLRGSPSAWERWVFHFA
HLRQLPVLIPYIPIENPQLSDTAYEVALVALTTNASFHELLLTTIKSWPPTLYSASPVIS
AIEPQLNSSSMTNSLKEALAELYVINSQYEKALSLFAELLKPEVFEFIEKHSLHDAIHDK
VVNLMLLDCKRAVHLLIQHRDIIPPYEVVEQLLHASKSCDKKYLLHQYLHALFEVDIHAG
KDYHDMQLELYADYEPRMLLPFLRTSQHYRLDKAYEIFAQKEFVKEQVFVLGRMGNAKEA
LSTIINKLEDIQEAVEFVTEQHDDELWDELIRQCLQKPEMVGMLLEHTVGNLDPLYIVSL
VPDGLEIPKLRDRLVKIVTDYRTETSLRHGCNDILKADCVNLLVKYYHEARRGVCMASMD
EEAQGARVNEGSSRTGDRSSTLRNLEMKSRTRCGARCCLCFDPLSIQDMSFIVFYCCHAY
HQSCLEGGLDSMKSNSNARDSDDGSEDDDGSPSGESRMRCVLCTTAAA
NT seq 2847 nt   +upstreamnt  +downstreamnt
atgtcgtccgccgcgcggcgcgccagccacccggcgctggtgaacggggacggggagtac
gggcgggaggaggaggacgaggaggacgaggagggggaggagggggagggggacgagccg
gaggaggagccgcggctcaagtaccagcggctgggcgggagcgtgccggcgatcctctcc
accgacgccgccgccgccatcgccgtcaccgaccgcgccgtcctgctcggcacccacgac
ggcaccctccacatcctcgacttccagggcaaccagtcaaaggagatcaaggctcacaca
gcaaccattaatgacatcagttttgaagatcgtgaatatataggaagctgctcagatgac
ggcacagtagtaataagcaacctcttcactgatgagaaactcaagtttgagtaccatcgc
cccatgaaagcaattgctttagatcctcagtattcccggagcaacaatagatttgctaca
ggtggcttagcaggtcaagtacttgtgctgacaaagaagagttgggtatcaggttataac
aaaaaggttctgcgtgagggtgaaggaccgatccattctatgaagtggaggacagatctt
cttgcctgggctaatgatgcaggggtgaaagtgcatgacatgaaaacggacagaggaatt
gcattcatagagaaaccaaaaggaattcctcggccagaagttttacttcctcacttggtc
tggcaggacgacacagttttagttattgggtggggaacaagtgtcaaggttgctgcaatt
cgaacagattcatcccaaggactcaatggaatgcaaaggagcatttccgcagcaagttct
gagaagtatgttgatattgtgggctctttccaaactggctaccacatatctggaatcgct
ccatttggcgatcttttggttatgcttgcttatatccccgaagaggatgatggagataaa
aaaattagtacttctgtttcttcacgccagggaacagcgcagcgtccagaaatacatctt
gtatcatggaaaaatgatgtgcttactactgatgctctgcccattcatggttatgagcac
tataaggcaaaggattacactctcgctcatgcacctttctcaggaagtagcaatgcgggt
ggacagtgggctgctggcgatgaaccgctgtattacatcgtctctcctaaggatattgtg
gtagcaaagccgagagatactgaagaccatattgcgtggcttcttcaacatggttggcat
gaaaaggcattggctgcagttgaagcaggacaagggaggactgagcttcttgatgaggtg
ggcacacgataccttgatcacttgatcattgaaagaaaatatgctgaagcagcacaactc
tgtccaaagttactgcgaggatctccttcagcatgggagaggtgggtctttcactttgct
catctccgccagcttcctgtgttgatcccttacatacccatagagaatccacagctgagt
gatactgcttatgaggttgctcttgtagctttaactaccaatgcgtcttttcacgaactt
ctcttgactacaataaaaagttggccacctacattatactctgcttcaccagtcatatct
gctattgagccacagctcaattcctcatcgatgactaactcattaaaagaggctttagct
gagttgtacgtgatcaacagtcaatatgaaaaggccctttctctcttcgctgaactgctg
aagcctgaagtatttgagtttattgagaagcacagtttgcatgatgccattcatgataag
gttgtcaatcttatgctattggattgtaaaagagcagtccatctattgatccaacatcgt
gatatcattcccccgtatgaagtcgtggagcaactgttgcatgcgagtaaaagttgcgac
aaaaaatatctgttgcatcagtatttgcatgctttgtttgaggtagacatacatgctgga
aaagattaccatgatatgcagctggagctttatgcggattatgagccaaggatgttacta
cccttccttcgtaccagccagcattacaggcttgacaaggcatatgaaatatttgcacaa
aaagaatttgtcaaggagcaagtttttgttcttggtcgtatgggaaatgctaaggaagcg
ctttctacaattataaacaaactggaagacatacaggaggccgttgaatttgttacggag
caacatgatgatgaattatgggacgaactgataagacagtgcctccaaaagcctgaaatg
gttgggatgctgttggaacatactgtcggcaatcttgaccctctgtacattgtcagtttg
gttccagatgggctagaaatacccaaattgcgagatcgccttgtgaagattgtgacagac
tatcgaacagaaacttcactgagacatggatgcaacgatatactaaaggccgattgtgtc
aatcttttggtcaaatactaccatgaggctcggcgtggggtctgcatggcaagcatggac
gaggaggcacaaggagccagagtcaatgaaggatcttcgcgaacaggcgacagatcatcg
actttacgtaatctagagatgaaatccagaacgagatgtggcgctcgatgctgcctgtgc
ttcgaccctttgtccatccaggacatgtcattcatcgtgttctattgctgccatgcgtat
catcagtcttgcctcgaaggcgggctggactcgatgaaatcaaacagcaacgcccgggac
agcgacgatgggtcggaggacgacgacggttccccgtcgggcgagtctagaatgcggtgt
gtgctgtgcaccacagctgccgcataa

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