KEGG   Aegilops tauschii (wheat D): 109746832
Entry
109746832         CDS       T04345                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03030  DNA replication
ats03410  Base excision repair
ats03420  Nucleotide excision repair
ats03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109746832
   03410 Base excision repair
    109746832
   03420 Nucleotide excision repair
    109746832
   03430 Mismatch repair
    109746832
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ats03032]
    109746832
   03036 Chromosome and associated proteins [BR:ats03036]
    109746832
   03400 DNA repair and recombination proteins [BR:ats03400]
    109746832
DNA replication proteins [BR:ats03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    109746832
  DNA Replication Termination Factors
   ELG1-RFC complex
    109746832
Chromosome and associated proteins [BR:ats03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    109746832
DNA repair and recombination proteins [BR:ats03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     109746832
  Check point factors
   HRAD17(Rad24)-RFC complex
    109746832
SSDB
Motif
Pfam: Rep_fac_C AAA Rad17 DNA_pol3_delta2 RCF1-5-like_lid AAA_16 AAA_22 AAA_assoc_2 DNAX_ATPase_lid AAA_11 AAA_30 DUF815 AAA_5 RuvB_N ATPase_2 AAA_7 AAA_14 bpMoxR AAA_24 AAA_19 nSTAND3 ResIII AAA_3 AAA_28 ABC_tran MCM AAA_25 SLFN-g3_helicase
Other DBs
NCBI-GeneID: 109746832
NCBI-ProteinID: XP_020161524
UniProt: A0A453PNK4
LinkDB
Position
6:437213490..437217320
AA seq 360 aa
MAGATAAAPMDIDGAAAAPPAFKGKAPLSAAAAVKSSPWVEKYRPQSLADVAAHRDIVDT
IDRLTDENRLPHLLLYGPPGTGKTSTILAVARKIYGSQYGNMILELNASDERGIGVVRQQ
IQDFASAHSLSFGAKPAVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKI
IPALQSRCTRFRFAPLDGSHVTERLRHIIKSEGLDVDEGGLTALVRLSNGDMRKSLNILQ
STHMASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKHIADMKMRKGLALIDII
REVTMFVFKIKMPSNVRVKLINDLADIEYRLTFACNDKLQLGALISTFTTARTAMVAAAD
NT seq 1083 nt   +upstreamnt  +downstreamnt
atggcgggcgccaccgccgccgctccgatggacatcgacggcgccgccgccgcgcccccg
gccttcaagggcaaggcgccgctctccgccgccgccgccgtcaagtcctcgccctgggtc
gagaagtaccggccccagtccctcgccgacgtcgccgcccaccgcgacatcgtcgacacc
attgataggcttacagatgagaataggcttccacatttgttgctctacggtccacctggc
actgggaaaacatcaacaatactagctgtcgcgaggaagatatatggctcacagtatggc
aacatgattctggagctcaatgcatcagatgaacgtggaattggtgttgtcaggcagcag
atacaggactttgctagtgcacacagcctctcttttggagcaaagcctgctgttaagttg
gtcctcttggatgaagcagatgccatgaccaaggatgcacaatttgcattgcgaagagtc
attgagaagtatacaaggagcacaaggtttgcactcatatgcaatcatgtgaacaaaatc
atcccagcactgcaatcaaggtgcactaggtttaggtttgctccacttgatggctctcat
gttactgagcgtcttcgacatataataaaatctgaggggcttgatgtagatgagggtggc
ttgactgcccttgttcggttaagtaatggtgacatgaggaagtctttgaatatattgcag
tcaacacacatggcatcccagcaaataacagaagaagctgtctacctttgcacgggaaac
cccatgcctaaagatattgagcagatagcgttttggttactaaatgaaccattttcaacc
agcttcaaacatatagctgatatgaagatgagaaaaggtctggccttgattgatatcata
cgggaggtcactatgtttgtgttcaaaataaaaatgccatccaatgtacgagtaaagttg
atcaatgatttggcagatatcgagtatcggcttacctttgcttgcaacgataaactgcag
cttggggcactgatctcgactttcacgactgctcgcacggctatggttgctgccgccgac
taa

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