Aegilops tauschii (wheat D): 109747944
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Entry
109747944 CDS
T04345
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats00040
Pentose and glucuronate interconversions
ats01100
Metabolic pathways
Module
ats_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109747944
Enzymes [BR:
ats01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109747944
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
109747944
NCBI-ProteinID:
XP_020162577
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Position
7D:complement(115870878..115872933)
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AA seq
420 aa
AA seq
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MASIVPLFSLLSLFLCCALAKGGMKMAPSTNGADHRGRSLQSDHVFSVLTYGAYGDGRHG
DTKALSKAWAAACSSLNPSIMLIPGGKKYLTKHLTFSGPCKSSITLMIEGTLVAPPKRLY
WIEDTIRHWILFRSVRGLTVTGGGTIDGNGKIWWQNSCKVNSKLPCRQAPTALTFYSCTN
LEVNNLELLNSQQIHISVEHCSDVRMSRLSITAPGTSPNTDGIHIAHSKDVKVMDCAIKT
GDDCMSIEDGTENLHVNNIVCGPGHGISIGSLGDRNSQAQVANITIDGARLRGTTNGARI
KTWQGGWGYAKNIVFQNMMMDNVQNPIIIDQNYCDSATPCNEQKSAVEVSNVLFKNIRGT
SASREAIKLSCSRAVPCHGIALHNVRLTLKRGGGDAKSTCENAKWRKLGTVMPQPCSLND
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcctccattgtgccccttttctctctactgtcattgttcttgtgttgtgctcttgcc
aagggaggcatgaaaatggccccttcgacgaatggggctgaccatagaggccggtcccta
cagtcggatcatgttttcagtgtgctcacatatggggcttacggcgatgggcgccatggc
gacacaaaggcattgtcgaaggcgtgggctgcagcttgctcctctttgaatcctagcatc
atgctcatccccgggggcaagaaatacctaaccaagcatttaaccttctccggcccatgc
aaatccagtatcacgttaatgattgaaggcactttggtagcccctccaaagagattatat
tggatagaggataccattaggcactggattttgttcagatctgtgagaggccttaccgtc
accggtggtgggaccattgatggaaatggaaagatttggtggcagaactcctgcaaagta
aactcaaaactcccttgcagacaagctccaacggctttgacgttctattcttgcacaaat
ctggaagtgaataatttagaactgctgaacagccagcaaatccacatatcggtggagcat
tgcagcgatgtaaggatgtcacgcctgtcgatcacagcacccggcactagccccaacacc
gacggcatccatatcgcccatagtaaggatgtcaaagtcatggactgtgcaatcaagacc
ggggacgactgcatgtcaatcgaggatggaaccgagaacctacatgtcaacaacattgtg
tgtggaccggggcatgggataagcatcgggagcttaggcgatcgcaattcccaagcccaa
gttgcaaacatcaccatcgacggggcgcgactgcgcggcacgacgaatggggctcgtatc
aagacatggcagggcgggtggggctacgcaaagaacatcgtgttccagaacatgatgatg
gataatgtacagaacccgatcatcatcgaccagaactactgcgactcggccacaccatgt
aatgaacagaaatcggctgtggaggtgagcaatgtgttgttcaagaacattagggggaca
agtgcctcaagagaggccatcaagctcagttgcagtagagctgtgccttgccatgggata
gccttgcacaacgtcaggcttactctaaaacgaggaggcggtgatgcaaagagcacctgt
gagaatgcaaaatggaggaaactgggaacggtcatgccacagccatgtagtctcaacgac
tga
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