Aegilops tauschii (wheat D): 109748272
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Entry
109748272 CDS
T04345
Name
(RefSeq) transcription elongation factor SPT6-like isoform X2
KO
K11292
transcription elongation factor SPT6
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ats03021
]
109748272
03036 Chromosome and associated proteins [BR:
ats03036
]
109748272
Transcription machinery [BR:
ats03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109748272
Chromosome and associated proteins [BR:
ats03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
109748272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
HTH_44
HHH_9
SH2
Tex_central_region
Tex_N
HHH_3
Motif
Other DBs
NCBI-GeneID:
109748272
NCBI-ProteinID:
XP_020162895
LinkDB
All DBs
Position
1:420350053..420359412
Genome browser
AA seq
1631 aa
AA seq
DB search
MGRTVVSDDEEDDFIEAEEEDEPRPSRRARDDVDEQDDDEDEEEDDEDEGQNEYEKDGFI
VDDADEDEEEEEEEARASDDERRKKKKKRKKKRETEDFELDEDDYMLLQDNNITGITRPK
PPENKFKRLKKAGRESEMDGRSGFSDHDGAGKSRTAEETVRSSLFGNEEPFEEDFVEEDQ
QVDEDEVGEDDMDDEMGDFIVDEEEIDVNGQVVKRKKVKRKPLRQAAGVSSSALQEAHDI
FGDVDELLALRKQELERDAINSGELRGNRLEDEFEPFILAEKYMTPKDEQIKETDIPERI
QLSEELTGHPIDGDANSEEESVWIHNQLTGDGFLSLFGKEQVNREIHQSDIVNVLNMLHT
HKFEVPFIAMYRKESCLSLVKDNDANEQANEEETRKMKWHKLLWAVQTLDRKWLLLQKRK
VALQIYYERRYDDEKRRIDDVTRQALNRQLYHSIIDALKEAKSEKEVEDVDAKFNLHFPP
GEVEEVGQFKRPKRKSLYSICHKAGLWEVANQFGRSAEQLGQHLTLTRIPEAGELDSGKD
SPEDVAANFTCAMFETSQDVLRGARHMAAVEIGCEPIVKKHIRGIFMDKAVVSTKPTPEG
SSVIDTYHQLSGVEWLQEKPLSKFGDAQWLLIQKAEEEKLLKVTITLPEDAKKALMSEAR
ENYLSDCVSKSAQLWDEQRKMILDDAFLNFLLPAMEKEARSLLTAKAKCFLSMEYGKQFW
DKVSVAPWKKKDADKKDADIDLDDESELRVMACCWGPGKPATTFVMLDSSGELVDVLYAG
SISLRSQGVAEQQRKRNDQQRVLKFMTDHSPHVVCVGASNLNCRQLKDDIYEVIFKMVED
HPRDVNPQMENFSIVYGDESVPRLYENSRISSDQLPAQSAIVKRAVALGRYLQNPLAMVA
TLCGPGKEILSWKLHPLEQFLTPDEKYEVVEQVMVDATNQIGFDVNLAASHEWHFSTLQF
VAGLGPRKASALQKELVREGSIFSRKELVKPLGRKVFMNASGFLRVRRSGAAAASAQIID
LLEDTRIHPESYALAKNLAKDVCAADGLEANEMDDDEQEMAIEHVREKQDQLDRLDIDEY
SRSIGDDKRETLLDIKLELKCGFKDRRTPYAEPSPDEEFWLLSGETEDNISDGRIVQVTV
RHIQDNRIICTFDSGLKAIVMGDNYSDDGFDLESLQLHEGDVLTGKIKNVNKNRFIVYLT
CKQSEMSRWPFSRSNHDPYYRAQKVVLTQDDKARKQKEAKKHFKPRMIVHPHFQNLTAEE
AMQFLGDKEPGEKVIRPSSRGPSFLTLTLKIFDGVFAHKEITESGKDHKDITSLLRLGKT
LTIGDETFEDLDEVIDRYVDPLVGHLKSMLSYRKFRKGLKGEVDDMLRAEKSENPMRIVY
CFGISHEHPGTFILSYIRSTNPHHEYVGLYPKGFRFRKKDFDSIDRLVSYFQKHIDKPPP
DAGPSMRNVAAMVPMKNSAWGSGGANDGRRGDGDNDRDRHFSGRSGGRFDSRNSSGGRGR
GRGRGRGNFGSDGDGGGGGGWTDNIGSGGGAWGTGGGSGGGDAGWGGGGDSNRGGGGDNG
WGAPASAAATDGGAGGWGTPAAAAATDGGAGGWGAATTPGAAGDDSGWGSAKKAVPAQDS
GGGWGSGGGGW
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcacggtggtttccgacgacgaagaggacgacttcatcgaggccgaggaagag
gacgagccgcggccgtcgcggagggccagggatgatgtcgacgagcaggacgacgatgag
gacgaggaggaggacgatgaagatgagggacagaatgagtacgagaaggatggcttcata
gtggatgatgcggatgaagacgaggaagaggaggaggaggaggcgagagctagtgatgat
gaaagacgcaagaagaaaaagaaaagaaagaagaagagagagacggaggatttcgagctt
gatgaggatgactacatgttgctccaggataataacattactggcatcactcgtccgaag
cctcctgaaaataagtttaagcggttgaagaaggcaggacgggaatctgaaatggatggg
cgctctggcttctccgatcatgacggagcaggaaaaagccggactgctgaggagacagtt
cgtagctccttgtttggtaatgaagaaccgtttgaggaggattttgtcgaggaggatcag
caggtagatgaagatgaggttggtgaagatgatatggatgatgaaatgggcgatttcatt
gtggacgaagaggaaatcgatgtgaatggccaagttgtgaaaaggaagaaggttaaaaga
aagcctctgcgacaagctgcaggtgtatcatcatctgcgctacaagaggcccatgatata
tttggggatgttgatgagctattagcactaagaaaacaagagcttgagagggatgctatt
aattccggcgagttgagaggaaacaggcttgaagatgagtttgaaccatttattctcgca
gaaaagtatatgacaccaaaggatgagcagataaaagaaactgatatacctgagaggatc
cagctgtctgaagagttaactggccatcctatagatggtgatgcaaatagtgaggaggaa
agtgtatggatacacaaccaactaaccggggatggatttctgtccctttttggcaaagag
caagtgaacagggagattcatcagagcgacatcgtgaatgtcttgaacatgctacatacc
cacaaatttgaagttccattcattgcaatgtataggaaggaaagttgcctgagtctggta
aaagataacgatgccaatgaacaagcaaatgaagaagagacgcgtaaaatgaagtggcat
aagctgctttgggctgttcagaccttagacagaaagtggcttcttcttcagaagcgcaag
gttgctttgcagatttattatgagagaagatatgatgacgagaaacgaagaatagacgat
gttacaaggcaggcacttaatcgacaactctaccactctatcattgatgcactgaaggaa
gcaaaatcagagaaagaagtggaggatgttgacgcgaaattcaatttacatttccctcct
ggtgaagttgaagaagtaggtcaatttaagcgaccaaaaaggaaatccttgtacagtatt
tgtcacaaggcaggattgtgggaggttgctaaccaatttggtcggagtgctgagcaatta
ggccaacatctaactttaacgaggatacctgaagcgggtgagcttgacagtgggaaagat
tctcctgaagatgttgctgcaaatttcacatgcgcaatgtttgaaacgtcacaagatgtc
cttcggggtgccagacacatggcagcagttgagatcggttgtgagcctattgtaaaaaag
catatcaggggtatcttcatggataaagcagttgtatcaacaaagcccacacctgagggc
agttcggtcatagatacttaccaccaattatcaggtgtggagtggctgcaagagaaacca
ctaagcaagtttggagatgcacagtggcttcttattcagaaagcagaggaagaaaagctt
ctcaaggttaccataacattgccagaggatgcaaagaaagcgctcatgtctgaggctcgt
gagaattacttaagtgactgtgtcagcaagtctgcacaactgtgggatgagcaacggaag
atgatactggatgatgccttcttgaattttctacttccagcaatggaaaaggaagctcga
tcactgttgacagcaaaagccaaatgttttctgtctatggaatatgggaaacagttctgg
gacaaggtttctgttgctccttggaagaagaaggatgcggacaagaaggatgcggacatt
gatctggatgatgagtcagagttaagagtaatggcctgctgctggggtcctgggaagcca
gcaaccacatttgtaatgctagactcatcaggagaattggttgatgttctgtatgctggt
tctattagtcttagatctcaaggtgttgctgagcagcagcgtaagagaaatgaccagcag
agggttctgaagttcatgactgaccattcgccacatgttgtgtgtgtaggagcttcgaat
ttgaactgcagacaactcaaggatgatatttatgaggttattttcaaaatggtggaagat
cacccaagagatgtgaacccacaaatggaaaatttcagcattgtctatggtgatgaatct
gtgcctcgcttgtacgagaactctcgaatatcttcagatcagctgcctgcccagtcagct
atcgtgaagcgtgctgtggcccttggtcggtacttgcaaaatcctttggcgatggttgca
acactttgtggacccgggaaagagatactgtcatggaaactacacccccttgaacagttc
cttactcccgatgagaagtatgaagttgttgagcaagtaatggtcgatgcgacaaatcag
atcggttttgatgttaatcttgctgctagccatgagtggcatttttccactttgcagttt
gttgctggtctgggaccgcgcaaagcttcagctttgcagaaggagttggtaagagaggga
tccatttttagccgcaaggagctggtgaaacccttaggcaggaaagtattcatgaatgcg
tctgggtttttacgcgtccgacgaagtggtgctgctgcagctagtgcccagatcattgat
cttcttgaggatacaaggatccatcctgaatcatatgcgttggcgaagaatttggccaag
gatgtctgtgccgcggatggacttgaagcgaatgagatggatgatgatgagcaagagatg
gcaattgagcatgtgagagagaagcaggatcaacttgaccgtcttgacatagatgaatac
agcagaagcatcggagatgataagagagaaacgttgttagacataaagttggagctaaag
tgtggtttcaaagatcggaggaccccttatgccgagccaagtccagatgaggagttctgg
ttgctttctggtgaaactgaggacaacatatcagatggaaggattgttcaagtaactgtt
cggcatatacaagataaccgaataatttgcacctttgattctgggttgaaagccatagtt
atgggagacaactattctgatgatggctttgatctagaatcactgcagttacatgaaggc
gatgtattaactggcaaaattaagaatgtgaataaaaataggttcatagtttacctaaca
tgcaagcagagtgaaatgagtagatggccattctcgagaagtaaccatgatccatactat
cgtgcacaaaaggtggttctgacccaggatgacaaggctcggaaacaaaaggaagcgaag
aaacatttcaagcccaggatgattgttcatcctcactttcagaatttgacggcggaagag
gcaatgcagttcctgggggacaaagagcctggcgagaaagtcattcggcctagctctagg
ggcccatcatttctaacactgaccctgaagatctttgatggtgtctttgcacacaaggag
ataaccgaaagtggaaaagatcataaagatattacaagtttgcttcgcctcggaaaaaca
ctgaccattggtgatgaaacttttgaagatcttgatgaggtaatagacagatatgtggat
ccattggtaggccacctgaaaagcatgctctcttatcgcaaattcaggaaagggttaaaa
ggcgaagttgatgatatgttgagggccgagaaatcagagaatcctatgagaatagtctat
tgttttggcatatctcatgaacatccaggcaccttcatattatcttacatcaggagtaca
aacccacatcatgagtatgttgggttatacccaaagggcttcagattccggaagaaagat
tttgacagcattgatcgtcttgtgtcatattttcaaaaacatattgacaaaccaccacct
gatgctggcccatcaatgcgaaatgttgcggcaatggtacctatgaaaaattcagcttgg
ggttctggtggcgcgaatgacggaaggaggggagatggtgataatgatagggacagacat
ttttctggaagatcaggaggcaggtttgattcaaggaacagttctggcggccgtggacgt
ggacggggtcggggtcgaggtaactttggcagtgatggtgatggtggcggtggtggagga
tggactgataacataggcagtgggggaggtgcgtggggcactggtggaggatctggaggc
ggggatgctggatggggtggtgggggcgacagcaaccgtggtggcggtggggataatggc
tggggcgcacctgcttctgccgctgccactgacggtggcgcaggaggctggggtacacct
gctgccgctgctgccactgacggtggcgccggaggctggggagcagctactactcctggt
gctgctggtgacgactcaggatggggcagcgccaagaaggccgtcccagcacaggattct
ggaggtgggtgggggtctggcggtgggggctggtga
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integrated database retrieval system
