Aegilops tauschii (wheat D): 109748778
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Entry
109748778 CDS
T04345
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03022
Basal transcription factors
ats03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109748778
09124 Replication and repair
03420 Nucleotide excision repair
109748778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ats03021
]
109748778
03400 DNA repair and recombination proteins [BR:
ats03400
]
109748778
Transcription machinery [BR:
ats03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109748778
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109748778
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
EAD1
Motif
Other DBs
NCBI-GeneID:
109748778
NCBI-ProteinID:
XP_020163392
UniProt:
A0A453DGR5
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All DBs
Position
2:complement(636977637..637000780)
Genome browser
AA seq
451 aa
AA seq
DB search
MPQVMVVARNFMDMVAALPAAKLDMLYDSAFICEAVLRSFPPLAKKYVIQMLYVSAPMPA
AAMQEWVLDEYASKHKVAIDRLLQLRVFVEVRDRRKEVSYKMNNKFQANMQKYLVSGGCL
PREPLPFSVTGRLPTLVELENYALDQWECFLLQLINSSQVEKGTTFSSSMMKTFQRGLLS
SRDGEAAKLSENGFQFLLMETNAQLWYIMREYISSAEERGVDPTDLISFLLELSFHTQGA
AYSLSTLTEVQRVAIMDLMELGLVKLQQGRKDSWFIPTKLATNLSSSLSDSAASKEGIVV
VETNFRLYAYSASKLHCEILRLFSRVEYQLPNLIVGAITKESLYGAFDNGITAEQIISFL
QQNAHPRVIDKIPIVPENVTDQIRLWENDRNRVEMVLSHVYEDFPSKDMFEQCCDHARDN
GYLLWEDAKKMRLIVNAEFHQEMREFLRRQR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaggtgatggtggtcgcgcggaactttatggacatggtggccgcactgcctgcc
gccaaactcgacatgctctacgattccgccttcatctgtgaggctgtactcaggtcgttc
ccaccgctggcaaagaagtacgtgattcagatgttgtacgtgtcggcaccaatgcctgct
gcggctatgcaggagtgggtgctggatgagtatgcctccaagcacaaggttgccattgat
aggctgctccagctcagggtctttgtggaagtacgtgacagaaggaaggaggtgagctac
aagatgaataataagtttcaagctaacatgcaaaagtatttggttagtggcgggtgtttg
ccaagggaaccactaccattcagtgtcactggcagattgcctacactcgtggaactagaa
aattatgctcttgatcaatgggagtgcttcttgctgcaattgatcaactcgtctcaagtt
gagaaagggaccactttcagctcgtctatgatgaagacgttccagcgaggtcttctgagt
tcaagggatggtgaagctgcaaagttaagtgagaatggcttccagtttctgctgatggag
acaaatgcacagctttggtatataatgagagaatacatttcatccgcagaggaacgtggg
gtggaccccacggacttgatatcatttctattggagcttagttttcatacacaaggagcg
gcttacagcctaagtactctgacagaagtccaaagagttgcaattatggatctgatggag
cttgggttagtcaaactgcagcagggccggaaagatagctggttcatacctacaaaattg
gctacaaatctctcatcgagcttgtcagattcagctgccagcaaagagggtattgtggtt
gtggagacaaactttaggttgtatgcgtactctgcttccaagctgcactgtgaaattcta
cgtcttttttcaagggtagagtatcaactcccaaaccttattgtgggagctattacaaaa
gaaagtctgtatggtgcatttgataacgggatcactgctgaacagataatttcattcctt
cagcaaaatgcccaccctcgtgtcatcgacaaaatacctatagtcccagagaatgttaca
gatcagattaggctgtgggagaatgaccgtaacagggtcgagatggtcctgtcacacgta
tacgaagattttccgagcaaggacatgtttgagcaatgctgtgaccatgcaagggacaac
gggtacttgctgtgggaggacgcgaagaagatgcgattgatagtgaacgcggagttccac
caagaaatgcgggagttcctgcgcaggcaaagatga
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