Aegilops tauschii (wheat D): 109748902
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Entry
109748902 CDS
T04345
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X3
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109748902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109748902
04121 Ubiquitin system [BR:
ats04121
]
109748902
03036 Chromosome and associated proteins [BR:
ats03036
]
109748902
03400 DNA repair and recombination proteins [BR:
ats03400
]
109748902
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
109748902
Ubiquitin system [BR:
ats04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
109748902
Chromosome and associated proteins [BR:
ats03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
109748902
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
109748902
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
zf-HC5HC2H_2
PTCB-BRCT
BRCT_2
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
109748902
NCBI-ProteinID:
XP_040257644
LinkDB
All DBs
Position
2:89939049..89945443
Genome browser
AA seq
656 aa
AA seq
DB search
MGMRGRPRRGSRGITSSPPPGFGPAAAAARPSSARSAGTNSAARTGMLFNVEIQPGYADP
ESLRHVWNRSASPMKGRKRKFGVDATKGESPGINASNTGEHLRSCRKGKGPGKRARLVDK
EGATGLGRVQTPTGLYEDECAFCQSFRTSEPVHGPLVLYHNGRIVSSDEADATNAIYVHF
KCMVWAPKVKSNDDGTFENVESEIERGSRWDCSRCNLRGAALGCYRAGCPNTYHVPCAFM
IPECRWDVENLHVWCPMHAPPDEMSSPTIETGILSPDPQNQSPANEISADCQMEDNQINP
LLGNEMSSPIIGSDIPSTVLQNSCPAKEISVDCQMEDKQFNPLVTSNSPLPGLVPGSSQY
LIKEGISALHRGEDLQVDQLNTSSSSSPQGQCTDKEGISTNYRAEDKLANQSSTPLDQWV
LLGIALSASEKDSLKEFASLTSSTLAQEWDKTVTHVIVGRNAGSRCGRSYEVQMAILSGK
WVVAAGWVVDCLVERISGPKPCLAKLIPSPEISYEVKFYDGARTSIDGPAKGRAGAAEGA
RKLLSGLHFCFSAYMHPEDREDIQNLIAAGGGQVLEGISPDGLRENLKRNPAEVYFIYHG
GPPRTPTSDFDLEVQECNKYVGSGARMIRHLQLFDAILCYDVLFLKPTGVFTKICK
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggggatgcgggggcggccccgccgcggctcgagagggataacgtcgtcgccaccacct
gggttcggccccgccgcggccgccgcgcggccgtcctccgcccgttccgcaggtaccaac
tctgctgctcgtaccggcatgctgttcaacgtagaaatacaacctggctacgctgatcct
gagtctctgcgacatgtttggaatagaagtgcttcccctatgaaaggccggaagaggaaa
ttcggtgttgatgcaaccaaaggtgaatcaccaggtattaatgcaagtaacaccggggag
cacctgcgttcctgcagaaaaggcaagggtccagggaaacgtgccaggttggtagacaaa
gaaggtgctactgggttggggagagttcaaacaccaaccggcttatacgaagatgaatgt
gctttctgccaatcatttagaaccagtgagccggtgcatggtccgctggtactgtatcac
aatggaaggattgtgtccagtgacgaggccgacgctactaacgccatatatgtccacttc
aagtgcatggtttgggccccaaaagtgaaatccaacgacgacggtacttttgagaacgtc
gagagtgaaatcgagcgtggttcaagatgggattgcagcagatgcaatctccggggagca
gcacttggttgttatcgcgcggggtgccccaatacttatcatgtcccatgtgcattcatg
ataccagaatgccgctgggatgttgagaatctccatgtttggtgtcccatgcatgcacca
cctgatgagatgagctcaccaacaattgagactggcattctttcccccgaccctcaaaac
caaagtccagctaacgaaatttctgccgattgccaaatggaagataaccaaattaatcca
ttgctgggcaatgagatgagctcaccaataattggaagtgacattccttccactgtcctt
cagaacagttgcccagctaaagaaatttccgtcgattgccaaatggaagataaacaattt
aatccactcgtcacatcaaattctcctttgcctggactagtgcctggttccagccaatat
ttaattaaagaaggaatatctgcccttcatagaggggaagatctacaagtagatcagctg
aacacctcaagttcttcctcgcctcagggccaatgtacggacaaagaaggaatttctacc
aattaccgagcagaagacaaactagcaaaccagtctagtacccctttggatcagtgggtt
ttgctcggcatagctttaagtgcatcagaaaaggattccttgaaagaatttgcatccttg
accagttcaaccttggctcaggaatgggacaaaactgtgactcatgttattgtgggcaga
aacgctggttctcgatgtggcagatcatatgaggtccagatggctatactgtctgggaaa
tgggttgtcgcagccggatgggttgtggattgcttggtggaaaggatttcaggtccaaag
ccttgcttggcaaagctgattccaagcccggaaatttcttatgaggtgaaattctacgat
ggtgcacgcacatcaattgatggaccagcgaaaggaagagctggagctgctgaaggggca
cgaaaactgctctcaggactgcatttctgcttcagcgcatacatgcacccagaagacaga
gaggacatccagaatctcatagcagctggtggagggcaagtactggagggaatcagccca
gacgggttacgtgagaatctgaaaagaaatccagcagaggtgtacttcatctaccacggc
ggccctccaaggacgcccacttcggatttcgatcttgaggtgcaggagtgcaacaagtac
gtgggatcgggagcgcggatgatcagacacctgcagctgttcgatgctatcctgtgctac
gatgtactattcctaaaaccgaccggtgtcttcaccaagatatgcaagtga
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