KEGG   Aegilops tauschii (wheat D): 109748937
Entry
109748937         CDS       T04345                                 
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03082  ATP-dependent chromatin remodeling
ats03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109748937
   03083 Polycomb repressive complex
    109748937
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ats03036]
    109748937
Enzymes [BR:ats01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     109748937
Chromosome and associated proteins [BR:ats03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     109748937
   HDAC complexes
    Sin3A-HDAC complex
     109748937
    BRAF-HDAC complex
     109748937
    REST complex
     109748937
    SHIP complex
     109748937
    MiDAC complex
     109748937
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     109748937
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    109748937
  Chromatin remodeling factors
   NuRD complex
    109748937
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 109748937
NCBI-ProteinID: XP_020163531
LinkDB
Position
7:467064987..467077586
AA seq 519 aa
MDISAGGGGNSLPTTGADGSKRRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLAHYGL
LDEMQVLKPHPARDRDLCRFHADDYVSFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLY
SFCQTYAGGSVGGAVKLNHGHDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQ
RVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDVGHSKGKYYSLNVPL
DDGIDDESYQSLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFM
RSFNVPVLLLGGGGYTIRNVARCWCYETGVALGHELTDKMPLNEYYEYFGPDYTLHVAPS
NMENKNTHRHLDEIRSRLLENLTKLRHAPSVQFQERPPEAEQPEQDEDQENPDERHHADS
DVEMDDAKPLEDSERRTSTQSARVKRESAETEVTTDQDDNGVASEQVRGPEPVADGVGSS
KQNPPIDASSMAIDEPAVVRAEPERSNKLQEQQALHQKP
NT seq 1560 nt   +upstreamnt  +downstreamnt
atggacatctcggccggcggcggcggcaactcgctgcccaccaccggcgcggacggctcg
aagcgccgcgtctgctacttctacgacgcggaggtgggcaactactactacgggcagggc
cacccgatgaagccgcaccgcatccgcatgacccacgccctgctcgcccactacggcctc
ctcgacgagatgcaggtgctcaagccgcaccccgcccgcgaccgcgacctctgccgcttc
cacgccgacgactacgtctccttcctccgctccgtcaccccggagacgcagcaggaccag
atccgcgcgctcaagcgcttcaacgtcggcgaggactgccccgtcttcgacggcctctac
agcttctgccagacctacgccggcggctccgtcgggggcgccgtcaagctcaaccacggc
cacgacatcgccatcaactgggccggcggcctccaccacgccaagaagtgcgaggcctcc
ggcttctgctacgtcaacgacatcgtcctcgccatcctcgagctcctcaaataccaccag
cgtgttctgtatgtggatatcgacatccaccatggggacggcgtggaggaggcgttttac
accacggacagggtgatgactgtctcattccacaagtttggggattatttcccagggaca
ggagacattcgtgacgttgggcactccaaagggaagtattattccctgaatgtcccgttg
gatgacggcatcgacgacgagagctatcaatcgttgttcaagccgatcatgggtaaggtt
atggagattttccgccccggcgcggtggtgctccagtgtggagcagattccttatcaggt
gacaggttgggctgcttcaacctatccattaaggggcacgcggagtgcgtgagattcatg
aggtccttcaatgttccggtgttgctgcttggtggtggtggttataccataagaaatgtt
gcacgatgttggtgctatgagacgggagttgcacttggtcatgagctaactgacaagatg
ccgctaaatgagtattatgagtattttggcccagattatactcttcatgttgcaccaagt
aatatggagaacaaaaacacacaccggcatttggatgaaataaggtcaagacttctcgaa
aatcttacaaaactccggcatgctcctagtgtgcagtttcaagagcgacctcctgaggcc
gagcaaccagagcaagatgaagatcaagagaatcctgatgaaaggcatcatgctgactct
gatgtggaaatggatgatgccaagcctctggaggactctgaaaggagaaccagtactcag
agtgcgagagttaagagagaatctgctgaaactgaggtgacaacagatcaggatgataac
ggagtagcttcagaacaagtaaggggcccagaacctgtggctgatggagttggttcctca
aaacaaaaccctcctattgatgcaagttcgatggccatagacgagccagctgttgtcagg
gctgaaccagagagatcaaacaaattacaggaacaacaagcattgcatcagaaaccatga

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