Aegilops tauschii (wheat D): 109749372
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Entry
109749372 CDS
T04345
Name
(RefSeq) endoribonuclease Dicer homolog 4 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ats03036
]
109749372
Chromosome and associated proteins [BR:
ats03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109749372
microRNA pathway
RISC loading complex
109749372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
Helicase_C
DND1_DSRM
ResIII
dsrm
PAZ
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109749372
NCBI-ProteinID:
XP_020163920
LinkDB
All DBs
Position
2:complement(471729494..471756181)
Genome browser
AA seq
1625 aa
AA seq
DB search
MGDISTAAASAGEREPQPKDPRTIARKYQLDLCKRALEENIIVYLGTGCGKTHIAVLLIY
ELGHLIRKPRRDVCIFLAPTVPLVLQQATVIANSTNFRVQSYYGDGKTPRDHENWETEMA
ESEVLVMTPQILLHSLQHCFIKMDSIALLIFDECHHAQVHKRHPYAQIMKEFYNNDMVKP
PRIFGMTASPVMGKGGSNKLNYTKCINSLEELLHAKVCSVDNAELESVLAFPDMEVHTYV
PLSQSNLTVTYNKELDRSKLESERILRESLYDFKDSQKKLKSLGRLHGNLVFCLQELGSF
GALQAAKAFLLSFDGDVLDRKESDMNDNSTRFKHHYLNKAISVLSSNILDGTHDDSFNLE
MVEPFFSNKIMVLINILSRYRLEENMKCIVFVKRITVARAIAHILQNLKGLDLWKCEFLV
GRHSGPKNMSRQKMDAIVENFSSGEVNLLIATSVGEEGLDIQTCCLVVRFDLPETVASFI
QSRGRARMTNSKYVVLLERGNHSEEKLLNDYIDGEGIMNGEIDLRTSNDVFDHLEEKSYQ
VEKTGASISTACSVSLLHRYCYNLPKDMFFNPSPAFIYIDDTEGIICRVILPPNAAFRQV
DGQPCQSNDEAKRDACLEALVKLYELGALTDFLLPGSGSRKNKASTTNGSASNSHDDESL
REELHEMLIPTILKPSTCKLDCPLNLHFYYIQFFPIPADRHYRIFGLFVINPLPMEAEKL
EVDLHLARGRIVKAGMKHLGTISFDEEQMMLARNFQEMFLKVLLDRSEFTVSHVMLLGNS
ETLQFNSTFYLLLPIKQELYGDIFMIDWPTVKRCLSSPVFKDPTGVSAHGSYLPDESLRL
LDNMYSKTDVVGSLIFAPHIKTFFVIHVILNELNARSEYDGATYEDHYKERFGIKLSHPE
QPLLHAKQLFNLHNLLHDRLRETTEGGRELMEHFVELPPELCSLKIIGFSKDMCSSLSLL
PSLMCRLENLLVAIELKDVMLSSFSEASQISASGILEALTTERCLERISLERFEVLGDAF
LKYVVGRHNFLTYEGLDEGQLTSRRSAIVNNSHLYELSIKRNLQVYIRDQHFEPTQFIAL
GRPCKVVCSADTEVNIHTDSRENCNLRCTKSHHWLHRKTIADAVESLVGAFLVEGGFKAA
FAFLHWVGIDVDFKDSSLYRVLDASSINLSLTNHTDVDELEELIGYNFKHKGLILEAFVH
PSFNKHSGGCYQKLEFLGDAVLEYLITSYLYSAYPDLKPGQITDLKSLAVSNNSLAYVAV
QKGIHKYLIKDSNYLSTAVNKFENYIRLPNSEKDLVEEPACPKVLGDIVESCVAAVLLDS
GFNLNYVWTLVLMLLEPVLSFSDMHMNPMREIRELCQCHELELGLPEPMKADGEYHVKVE
VNINSQVISSAAANRNSKVARKFAAQETLSKLKNYGYTHKNKSLEEILRDARKKEPELLG
YNEEPIKVEADISAEMNNLKIGKERDANISFQNTEISIRGTLRTSSQRTAGNTMFSKDDV
SIERNNQLKVAKQNACLPKGTTQKNIRKEYHGDMVNKTAKSFLFEVCAVSYWKPPEFELC
KEEGPSHLRRFTYKVTVQIRGPSETLLECYSDAQLQKKAAQEHAAQGALWYLRQHGYLPK
DEVRV
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacatctcgaccgcggcggcgagcgcgggggagcgcgagccccagcccaaggac
ccgaggacgatcgcgcgcaagtatcagttggatctctgcaagagggctctcgaggagaac
atcatagtgtacctaggcacaggatgcgggaagacccatatagccgtgttgctcatatac
gaacttggccatctcattcgcaaacccagacgtgatgtctgcatcttcctcgccccaaca
gttccccttgttctccagcaagcgacggtgattgcaaattccaccaatttcagagttcaa
agttactacggggatggtaaaaccccaagagatcatgagaactgggagacagagatggcg
gaatctgaggttcttgtaatgactccccagattttgttgcatagtttgcagcattgtttc
atcaagatggactcaattgcacttctgatattcgatgaatgccatcacgcacaagtgcat
aagcggcacccatatgcacaaattatgaaggaattctacaataatgacatggtgaagccc
cctcgcatttttggcatgactgcttcaccagtaatgggaaaaggcgggtctaacaagctt
aattacaccaaatgtatcaatagccttgaagaattattgcatgccaaggtctgttcggtt
gataatgcagaactggaaagtgtgcttgcttttcctgatatggaggtacacacgtatgtc
ccgcttagtcagtctaatcttactgtaacttacaacaaagaacttgatcgctcaaagctt
gagagtgaacgcatactacgcgagagcctatacgatttcaaggattctcagaagaaacta
aagtccctggggaggttgcatggaaatttagtattctgtttgcaagaacttggttcgttt
ggagctctgcaagctgcaaaggctttcctcctttcatttgatggtgatgttttggacaga
aaggagtctgacatgaacgacaattctaccagatttaagcatcactacctaaacaaagca
atttctgttctgagtagcaacatattagacggtacccatgatgattcatttaatctggag
atggtagaacctttcttctcaaataaaattatggttcttattaatattctctcgagatac
aggctagaggaaaacatgaagtgcatagttttcgtgaaaagaataactgttgcaagagca
atagcacatatcctccaaaatttgaaaggccttgatctttggaaatgtgagttccttgtg
ggacgccactcgggaccaaagaatatgtcaaggcagaagatggatgctattgttgaaaat
ttctcttctggcgaggtgaatcttttgattgctaccagtgtaggtgaagagggtctggac
attcagacttgttgccttgttgtgcggtttgatcttccagaaactgttgccagttttatc
cagtccaggggacgtgctcggatgacaaattctaaatatgttgttctcctggagagggga
aatcattctgaagaaaagttgcttaatgactatattgatggtgaaggcattatgaatgga
gagatagacttgagaacttcaaatgatgtgtttgatcacctcgaggagaaaagttatcaa
gtggaaaaaacgggtgcttccattagcaccgcatgtagtgtatctctactacatcgctac
tgctacaaccttcccaaggacatgttctttaatccttccccggcattcatctacattgat
gacactgaggggataatctgcagagtaattcttccaccaaatgctgcttttcgtcaagtg
gatggccaaccatgccaatcaaatgacgaggctaagagggatgcatgcttagaggcattg
gtgaaattgtatgaattgggtgctttgacagattttcttctgcctggttcaggttcaaga
aagaacaaggcatcaacaacaaacggttcagcaagcaacagtcatgatgatgaaagtcta
agagaagagcttcatgagatgttaattcccacaattctcaaaccttcaacatgcaaactg
gactgtccattgaacttgcatttctactatattcaattctttcccataccagcagacaga
cattatcggatatttggtctttttgtgatcaacccccttcctatggaagctgaaaagttg
gaggttgatttgcatctggctcgtggcaggattgtgaaagcaggaatgaaacatttagga
acgatatcatttgacgaagaacagatgatgcttgcacgcaatttccaagaaatgtttctg
aaggttctcctggacagatctgagttcactgtatctcatgttatgttgttgggcaacagt
gaaacactacagtttaattcaaccttttacctgctgcttccaatcaagcaggaattgtat
ggtgatatatttatgattgactggccaacagttaagcgctgtttatcatcaccggttttt
aaagatccaactggtgtgtctgcgcatggatcatatttgccagatgagtctttaaggctt
cttgataatatgtacagtaaaactgatgtcgttggcagtctaatctttgctccccatatt
aagacatttttcgtcattcatgtcattctgaacgaactaaatgctagaagtgaatacgat
ggtgctacttatgaagatcattacaaggaaaggtttggtatcaaactatcacatcccgag
cagccacttctgcacgctaagcagctcttcaatctgcataatttgcttcatgaccgatta
cgggagaccacagaaggaggtcgtgaattgatggagcactttgtggagttgcctccagag
ctatgctctttgaagataattgggttttcaaaggatatgtgtagctccctgtctttgtta
ccatcgttgatgtgtcggttggagaatttgctggtagctattgagttgaaggatgtcatg
ttgtcttcattctcagaggcttctcaaattagtgcttctggtatccttgaagcacttacc
accgaaaggtgtttggagaggatttctttggagcgctttgaagtcttaggtgatgctttt
ttgaagtatgtggttggacgtcacaactttcttacatatgaaggacttgatgaagggcaa
ttgaccagcagacgttctgctatagtgaataattcacatttatatgagttatcaatcaaa
agaaatttgcaggtgtacatacgggatcaacactttgaaccgacacagttcattgcactg
ggaaggccttgtaaagttgtttgcagtgctgacacagaagtgaatatacacacagatagc
cgagaaaactgtaacttgaggtgtacaaagtcgcatcattggttgcataggaagactata
gcggatgctgttgaatcgcttgtcggagcatttcttgttgaaggtggattcaaagctgca
tttgcattccttcactgggtgggaatagatgttgatttcaaagattcatctctatataga
gtattagatgcaagctccatcaatttatctctcacgaaccacaccgacgtcgatgagctt
gaggaattaatcggttacaatttcaaacataagggtctaattctcgaagcatttgtgcat
ccttcattcaataaacattctggaggatgctaccagaaattggagttccttggagatgct
gttttggaatatttgataacctcatacctctactcagcttatcctgatctaaagcctggt
caaataaccgatttaaaatcgttagctgtcagtaataattcgcttgcatatgtggcagtc
cagaaaggtatccataagtatcttataaaggattcaaattatctttcaacagcagtgaat
aagtttgagaattatattagacttcccaattcagaaaaagacttggtagaagaaccagca
tgcccaaaggttcttggtgatattgtcgaatcttgtgttgctgcagttcttttagattca
ggattcaacctgaactacgtttggacgctagtgcttatgcttctagagccagtgttgagc
ttctctgacatgcacatgaatcccatgagagaaattcgggaactttgtcaatgtcatgaa
cttgagttgggccttcccgaacctatgaaagccgatggagagtaccacgtcaaagtggaa
gttaacataaacagccaggtgataagttctgccgctgcaaatcggaattcaaaagttgct
aggaagtttgctgcacaagaaacactttctaaactgaagaattatggatacacacataaa
aacaagtcactggaagagattttgcgagatgctaggaagaaagaaccagaactactaggt
tataatgaagaaccaatcaaagtcgaggctgacatatctgcagaaatgaataatctgaag
ataggtaaagaaagggatgcaaacatctctttccaaaatacggaaatttctattcgtggg
actcttagaacctctagccaaagaacagcagggaataccatgttttccaaggatgatgtc
agtattgaaaggaataatcagctcaaggttgcaaagcagaatgcctgtctgccgaaggga
acaactcagaaaaatattagaaaggagtatcatggtgatatggtaaataaaacagcaaag
tctttcctttttgaagtatgtgccgtaagttattggaaaccccctgaatttgaattgtgc
aaagaagaagggccaagccacctccgaagattcacgtacaaggttacagttcagatcagg
ggaccctcggagacactcttggagtgctacagcgatgctcaactacagaagaaggccgca
caagagcatgccgcgcagggggctctgtggtatctcaggcaacatgggtacctacccaaa
gatgaagttcgtgtgtag
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integrated database retrieval system
