KEGG   Aegilops tauschii (wheat D): 109749628
Entry
109749628         CDS       T04345                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03030  DNA replication
ats03410  Base excision repair
ats03420  Nucleotide excision repair
ats03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109749628
   03410 Base excision repair
    109749628
   03420 Nucleotide excision repair
    109749628
   03430 Mismatch repair
    109749628
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ats03032]
    109749628
   03036 Chromosome and associated proteins [BR:ats03036]
    109749628
   03400 DNA repair and recombination proteins [BR:ats03400]
    109749628
DNA replication proteins [BR:ats03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    109749628
  DNA Replication Termination Factors
   ELG1-RFC complex
    109749628
Chromosome and associated proteins [BR:ats03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    109749628
DNA repair and recombination proteins [BR:ats03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     109749628
  Check point factors
   HRAD17(Rad24)-RFC complex
    109749628
SSDB
Motif
Pfam: Rep_fac_C AAA Rad17 DNA_pol3_delta2 RCF1-5-like_lid AAA_lid_RFC1 AAA_16 AAA_assoc_2 AAA_22 DNAX_ATPase_lid AAA_30 AAA_11 DUF815 AAA_5 RuvB_N ATPase_2 nSTAND_NTPase5 AAA_14 AAA_7 bpMoxR AAA_24 AAA_19 nSTAND3 ResIII AAA_3 AAA_28 ABC_tran SLFN-g3_helicase TniB MCM
Other DBs
NCBI-GeneID: 109749628
NCBI-ProteinID: XP_020164168
UniProt: A0A453CUF5
LinkDB
Position
2:complement(547692531..547696223)
AA seq 359 aa
MAGTTAAAPMDIDAAAVRPATKGKATLSAAAAVKSSPWVEKYRPQSLADVAAHRDIVDTI
DRLTDENRLPHLLLYGPPGTGKTSTILAVARKIYGSQYGNMILELNASDERGIGVVRQQI
QDFASAHSLSFGAKPAVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKII
PALQSRCTRFRFAPLDGTNVSERLQHVIKSEGLDVDKGGLTALVRLSNGDMRKALNILQS
THMASSQITEEAVYLCTGNPMPKDIEQIASWLLNEPFSTSFKYISDTKMRKGLALIDIIR
EVTMFVFKINMPSNVRVKLINDLADIEYRLTFACNDKLQLGALISTFTTARTAMVAAAA
NT seq 1080 nt   +upstreamnt  +downstreamnt
atggccggaaccaccgccgcagctccgatggacatcgacgccgccgccgtgcggccggcc
accaagggcaaggcgaccctctccgctgccgccgccgtcaaatcttcgccgtgggtcgag
aagtaccgcccccagtccctcgccgacgtcgccgcccaccgcgacatcgtggacaccatt
gataggcttacagatgagaataggcttccacatttgttgctctacggtccacctggcact
gggaaaacatcaacgatactagctgtcgcgaggaagatatatggctcgcagtatggcaac
atgattcttgagctcaatgcatcagatgaacgtgggattggtgttgtaaggcagcagata
caggactttgctagtgcacacagcctctcttttggagcaaagcctgctgttaagttggtc
ctcttggatgaagccgatgccatgaccaaggatgcacaatttgcattgcgaagagtcatt
gagaagtatacaaggagcacaaggtttgcactgatatgcaaccatgtgaacaaaataatt
ccagcactacaatcaaggtgcactaggtttagatttgctccacttgatggcactaatgtt
agtgagcgtcttcaacatgtaataaaatctgagggacttgatgtcgataagggtggcttg
acagccctcgtgcggttaagtaacggtgacatgaggaaggctttgaatatattgcagtca
acacacatggcatcctcacaaataacagaagaagctgtctacctttgcacgggaaatccc
atgcctaaagatattgagcagatagcgagttggttactaaatgaaccattttcaaccagc
ttcaaatatatatctgatacaaagatgagaaaaggtctggccttgattgatatcataagg
gaggtcactatgtttgtgttcaaaattaatatgccatccaatgtacgagtaaagttgatt
aatgatttggcagatatcgagtataggctaaccttcgcctgcaacgacaaactgcagctt
ggggcactgatctcgactttcacgactgctcggacggctatggttgctgccgccgcctaa

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