Aegilops tauschii (wheat D): 109749675
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Entry
109749675 CDS
T04345
Name
(RefSeq) uncharacterized protein
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109749675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ats03000
]
109749675
03019 Messenger RNA biogenesis [BR:
ats03019
]
109749675
04121 Ubiquitin system [BR:
ats04121
]
109749675
Enzymes [BR:
ats01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109749675
Transcription factors [BR:
ats03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
109749675
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109749675
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109749675
Ubiquitin system [BR:
ats04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109749675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
109749675
NCBI-ProteinID:
XP_020164214
LinkDB
All DBs
Position
3:119126857..119133833
Genome browser
AA seq
958 aa
AA seq
DB search
MSTQAKDKCPLCMETMDLTDKQLKPCKCGYEICLWCWHHIMEMDQKDECGGRCPGCRSIY
NKDRILGTSISNQILKELCADKSNLQHEQTKLQKQKSATNQLRVAEEPIDHPDNVRVIQR
KLVYIIGMPSEFASEKILRQKSFLGQYGKIENIIIDNIGANQQIPDSGRVYVTYSREEEA
VLCIEAVNGYILDGRPLKATFGVTRYCHIWLSNKVCQKPNCSYVHQKALPEDVCTKDDVG
VFCARIQHLLGMNMKGPQQRSGVTLPSPSGCNSRTTMFSGNSKDKICVNDVVVPRVCNNN
PGTLPAAIPRDSGKPPSIVNTALHQQNNHESVLSQQKQVASKSQELPPLRPKDQLASSDD
KSNTSAHLGNGISDSKKMATEVNGTVETSWRKPQYANIVSQGSSGPARRLTVLTRELTST
DTRSKVTGQVGSWISSKAAGQASSSISSTDTRSKAAGQVISSISSTDTRSKAAGQVVSWT
SSTDTRSKAAGQVVSWTSSTDTRPKATGQVVSWASSTDTRPKAAGQVVSSTSSTDTRSKA
AGQVVSLTSSTDTRPKATGVTWISNSKRLGLPKDEGHDRTAIPRYQAVKGVSQKPEEPSN
SLTSQLSSAAVKPHVRAEEKNACSDTRDNPVQEKNMQAMVSTVSASATALESSRVIPTVL
RNLSSSNGVSQTSAGPDKLSNLHRKLASENQSKILHQQKAALSNKAVASGSILGNQVVCT
DGKHQSSPQGGDHSLCNGEMTLLGAKIPSEHAEKIRLPRRVSDILAKDSQGRKRLVCPPG
FSELRKSSDSGKSVSMSSSTCSALRSTSDAPAQDSCSVTDQPDIISWVSECLEDDGDHKQ
SSGVSISSTLSSTDTIWRPTPQVPGPSFGASNHCQLPPYPGGLPQSMGGDQNPMRCCCTF
PSVSNRPNQMPEYWNGGANSYMAPGGYDTFYQNWTNGSADPGLNSAQVDLSYSMYTLF
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgagtacccaagctaaagacaaatgcccactttgcatggagaccatggatttgacagat
aaacagctgaaaccttgtaaatgcggatatgagatatgtctttggtgctggcatcatata
atggaaatggaccagaaggacgagtgtggcgggaggtgccctggatgccgttctatctac
aacaaggataggattttggggactagcatcagcaaccaaatattaaaggaactttgtgct
gacaaatcaaatttgcaacatgaacaaacgaagcttcaaaagcagaaatcggcaacgaat
cagttgagagtggcagaagaaccaatagatcatccagataatgttcgtgtgattcagagg
aagcttgtgtatattattgggatgccttctgagtttgccagtgaaaagattctaaggcaa
aagagttttcttgggcaatatggaaaaatagagaacatcattatcgacaacattggagct
aaccaacagattcctgactctggccgtgtatatgtcacatattcgagagaagaagaagct
gtactgtgcatagaggcggttaatggttacatcttggatggcagacctttaaaggcaacc
tttggtgttacaagatattgtcatatatggctaagcaataaggtttgccaaaagccaaat
tgttcatatgtgcaccagaaagccctaccagaagatgtttgtaccaaagatgatgttggt
gtgttttgtgcaaggattcagcatttgctgggaatgaatatgaagggcccccagcagcgt
tcaggagttactttaccttctccaagtggctgcaattcaagaactaccatgtttagtggg
aattccaaagataaaatttgcgtcaatgatgtagtagtacccagagtttgcaataataat
cctggtaccctgccagcagcaattccacgggattcaggcaagccgccatccattgtaaat
acagctcttcatcagcagaataatcatgagagcgtacttagtcagcaaaaacaggttgcc
tccaaatctcaagaattaccaccacttagaccaaaggaccagttggcttccagcgatgac
aaatccaatacatctgcgcatttgggaaatggaatttcagattccaagaaaatggccaca
gaagtaaatggaacagttgaaacttcatggagaaaaccacaatatgctaatatagtttca
caaggatctagcggaccagctcgccgcttgactgtgcttaccagggagttgacatctact
gatacaaggtctaaagttacaggacaagtaggtagctggatatcatctaaagctgcagga
caagcatccagttcgatatcatctactgatacaaggtctaaagctgcaggacaagtaatt
agttcgatatcatctactgatacaaggtctaaagctgcaggacaagtagttagttggaca
tcatctactgatacaaggtctaaagctgcaggacaagtagttagttggacatcatctact
gatacaaggcctaaagctacaggacaagtagttagttgggcatcatctactgatacaagg
cctaaagctgctggacaagtagttagttcgacatcatctactgatacaaggtctaaagct
gcaggacaagtagttagtttgacatcatctactgatacaaggcctaaagctacaggagtt
acttggatttcaaattccaagagacttggtttgccaaaagatgaaggccatgacagaact
gcaattcccagatatcaggctgtaaagggagtttcccagaaaccagaggaaccttccaat
agtttaactagccagctttcctcagcagctgttaaacctcatgttagagcagaggagaag
aatgcatgctcagataccagggataatccagtccaagaaaagaacatgcaggctatggtg
agcactgtatcagccagtgcaactgcattggagagttcgagggtcattcctaccgtgctc
cgtaatctttcaagttctaatggtgtgtcacagacatcagctgggccagataagctttca
aatttgcacagaaagttggcatctgaaaaccaatcaaagatcttacatcaacaaaaggca
gctctttcaaataaagctgtagcaagtggtagcattctcggcaatcaagttgtgtgcact
gatggcaaacatcaatcttcaccacaaggaggggatcacagcttgtgcaatggggaaatg
accttgttaggagctaaaattccatctgagcatgcagagaagattcggctaccaagacga
gtcagtgatatattggccaaggatagtcaaggaagaaagagattagtttgtccacctgga
tttagcgagcttcgcaagtcttctgattcaggcaagtctgtatcaatgagctcctcaact
tgctctgcacttcgctctacatctgatgccccggcacaagattcatgctctgttacagac
caaccagacatcattagctgggtctcagagtgcctggaagatgatggagatcacaaacaa
agtagtggtgtgagcatatcttccacactcagctccactgataccatatggagacccaca
ccacaggttcctggccccagcttcggtgcatcaaatcactgtcagttacctccataccct
ggtggcttgccccagtccatgggtggggatcaaaaccccatgagatgctgctgcactttt
ccgtccgtaagcaatagaccaaatcagatgcctgaatattggaatggaggtgccaatagc
tacatggcccctggtgggtatgatacattctaccagaactggactaatggaagcgcagat
ccaggcctgaacagtgcacaggttgacctttcatactccatgtacaccctgttctga
DBGET
integrated database retrieval system