KEGG   Aegilops tauschii (wheat D): 109749675
Entry
109749675         CDS       T04345                                 
Name
(RefSeq) uncharacterized protein
  KO
K10643  CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109749675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ats03000]
    109749675
   03019 Messenger RNA biogenesis [BR:ats03019]
    109749675
   04121 Ubiquitin system [BR:ats04121]
    109749675
Enzymes [BR:ats01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109749675
Transcription factors [BR:ats03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    109749675
Messenger RNA biogenesis [BR:ats03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     109749675
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     109749675
Ubiquitin system [BR:ats04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109749675
SSDB
Motif
Pfam: zf-RING_4 RRM_1 Baculo_IE-1
Other DBs
NCBI-GeneID: 109749675
NCBI-ProteinID: XP_020164214
LinkDB
Position
3:119126857..119133833
AA seq 958 aa
MSTQAKDKCPLCMETMDLTDKQLKPCKCGYEICLWCWHHIMEMDQKDECGGRCPGCRSIY
NKDRILGTSISNQILKELCADKSNLQHEQTKLQKQKSATNQLRVAEEPIDHPDNVRVIQR
KLVYIIGMPSEFASEKILRQKSFLGQYGKIENIIIDNIGANQQIPDSGRVYVTYSREEEA
VLCIEAVNGYILDGRPLKATFGVTRYCHIWLSNKVCQKPNCSYVHQKALPEDVCTKDDVG
VFCARIQHLLGMNMKGPQQRSGVTLPSPSGCNSRTTMFSGNSKDKICVNDVVVPRVCNNN
PGTLPAAIPRDSGKPPSIVNTALHQQNNHESVLSQQKQVASKSQELPPLRPKDQLASSDD
KSNTSAHLGNGISDSKKMATEVNGTVETSWRKPQYANIVSQGSSGPARRLTVLTRELTST
DTRSKVTGQVGSWISSKAAGQASSSISSTDTRSKAAGQVISSISSTDTRSKAAGQVVSWT
SSTDTRSKAAGQVVSWTSSTDTRPKATGQVVSWASSTDTRPKAAGQVVSSTSSTDTRSKA
AGQVVSLTSSTDTRPKATGVTWISNSKRLGLPKDEGHDRTAIPRYQAVKGVSQKPEEPSN
SLTSQLSSAAVKPHVRAEEKNACSDTRDNPVQEKNMQAMVSTVSASATALESSRVIPTVL
RNLSSSNGVSQTSAGPDKLSNLHRKLASENQSKILHQQKAALSNKAVASGSILGNQVVCT
DGKHQSSPQGGDHSLCNGEMTLLGAKIPSEHAEKIRLPRRVSDILAKDSQGRKRLVCPPG
FSELRKSSDSGKSVSMSSSTCSALRSTSDAPAQDSCSVTDQPDIISWVSECLEDDGDHKQ
SSGVSISSTLSSTDTIWRPTPQVPGPSFGASNHCQLPPYPGGLPQSMGGDQNPMRCCCTF
PSVSNRPNQMPEYWNGGANSYMAPGGYDTFYQNWTNGSADPGLNSAQVDLSYSMYTLF
NT seq 2877 nt   +upstreamnt  +downstreamnt
atgagtacccaagctaaagacaaatgcccactttgcatggagaccatggatttgacagat
aaacagctgaaaccttgtaaatgcggatatgagatatgtctttggtgctggcatcatata
atggaaatggaccagaaggacgagtgtggcgggaggtgccctggatgccgttctatctac
aacaaggataggattttggggactagcatcagcaaccaaatattaaaggaactttgtgct
gacaaatcaaatttgcaacatgaacaaacgaagcttcaaaagcagaaatcggcaacgaat
cagttgagagtggcagaagaaccaatagatcatccagataatgttcgtgtgattcagagg
aagcttgtgtatattattgggatgccttctgagtttgccagtgaaaagattctaaggcaa
aagagttttcttgggcaatatggaaaaatagagaacatcattatcgacaacattggagct
aaccaacagattcctgactctggccgtgtatatgtcacatattcgagagaagaagaagct
gtactgtgcatagaggcggttaatggttacatcttggatggcagacctttaaaggcaacc
tttggtgttacaagatattgtcatatatggctaagcaataaggtttgccaaaagccaaat
tgttcatatgtgcaccagaaagccctaccagaagatgtttgtaccaaagatgatgttggt
gtgttttgtgcaaggattcagcatttgctgggaatgaatatgaagggcccccagcagcgt
tcaggagttactttaccttctccaagtggctgcaattcaagaactaccatgtttagtggg
aattccaaagataaaatttgcgtcaatgatgtagtagtacccagagtttgcaataataat
cctggtaccctgccagcagcaattccacgggattcaggcaagccgccatccattgtaaat
acagctcttcatcagcagaataatcatgagagcgtacttagtcagcaaaaacaggttgcc
tccaaatctcaagaattaccaccacttagaccaaaggaccagttggcttccagcgatgac
aaatccaatacatctgcgcatttgggaaatggaatttcagattccaagaaaatggccaca
gaagtaaatggaacagttgaaacttcatggagaaaaccacaatatgctaatatagtttca
caaggatctagcggaccagctcgccgcttgactgtgcttaccagggagttgacatctact
gatacaaggtctaaagttacaggacaagtaggtagctggatatcatctaaagctgcagga
caagcatccagttcgatatcatctactgatacaaggtctaaagctgcaggacaagtaatt
agttcgatatcatctactgatacaaggtctaaagctgcaggacaagtagttagttggaca
tcatctactgatacaaggtctaaagctgcaggacaagtagttagttggacatcatctact
gatacaaggcctaaagctacaggacaagtagttagttgggcatcatctactgatacaagg
cctaaagctgctggacaagtagttagttcgacatcatctactgatacaaggtctaaagct
gcaggacaagtagttagtttgacatcatctactgatacaaggcctaaagctacaggagtt
acttggatttcaaattccaagagacttggtttgccaaaagatgaaggccatgacagaact
gcaattcccagatatcaggctgtaaagggagtttcccagaaaccagaggaaccttccaat
agtttaactagccagctttcctcagcagctgttaaacctcatgttagagcagaggagaag
aatgcatgctcagataccagggataatccagtccaagaaaagaacatgcaggctatggtg
agcactgtatcagccagtgcaactgcattggagagttcgagggtcattcctaccgtgctc
cgtaatctttcaagttctaatggtgtgtcacagacatcagctgggccagataagctttca
aatttgcacagaaagttggcatctgaaaaccaatcaaagatcttacatcaacaaaaggca
gctctttcaaataaagctgtagcaagtggtagcattctcggcaatcaagttgtgtgcact
gatggcaaacatcaatcttcaccacaaggaggggatcacagcttgtgcaatggggaaatg
accttgttaggagctaaaattccatctgagcatgcagagaagattcggctaccaagacga
gtcagtgatatattggccaaggatagtcaaggaagaaagagattagtttgtccacctgga
tttagcgagcttcgcaagtcttctgattcaggcaagtctgtatcaatgagctcctcaact
tgctctgcacttcgctctacatctgatgccccggcacaagattcatgctctgttacagac
caaccagacatcattagctgggtctcagagtgcctggaagatgatggagatcacaaacaa
agtagtggtgtgagcatatcttccacactcagctccactgataccatatggagacccaca
ccacaggttcctggccccagcttcggtgcatcaaatcactgtcagttacctccataccct
ggtggcttgccccagtccatgggtggggatcaaaaccccatgagatgctgctgcactttt
ccgtccgtaagcaatagaccaaatcagatgcctgaatattggaatggaggtgccaatagc
tacatggcccctggtgggtatgatacattctaccagaactggactaatggaagcgcagat
ccaggcctgaacagtgcacaggttgacctttcatactccatgtacaccctgttctga

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