Aegilops tauschii (wheat D): 109750189
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Entry
109750189 CDS
T04345
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109750189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109750189
03012 Translation factors [BR:
ats03012
]
109750189
Enzymes [BR:
ats01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109750189
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109750189
Translation factors [BR:
ats03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
109750189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
T2SSE
nSTAND3
AAA_19
NACHT
AAA_16
PhoH
ATPase
Motif
Other DBs
NCBI-GeneID:
109750189
NCBI-ProteinID:
XP_020164734
LinkDB
All DBs
Position
3:complement(9400629..9410180)
Genome browser
AA seq
1247 aa
AA seq
DB search
MLLASSVLRGRLRPLRRPRPLIMPSPLFLSRNPSPSSSSSTSLASPTPASAAMSTSGVYV
PPMRRLRSVIASTNGNLAPPPAVQPAWTPEWRADGRSLSPPSPPQPQQRRTAALPPRPPP
PQTQPLRQQSAGYSRYAYDDFSEEESDREMDRTSVSSKGGASTLENVDEWKWKLHMLLRN
DNEQEIMSREKKDRRDFDQLAQLADRMGLHSRQYSRIIVFSKVPLPNYRSDLDDKRPQRE
VSIPSGLQREVDALLADYLARKRTDSGNFPNAAFSRSSSTDSFATDESFYEQQDNQTSTN
VVMERIQRRKSLQLRNQQAAWQESNDGQSMMEFRRSLPAQKERQSLLEAISQNQVVVVSG
ETGCGKTTQLPQYILESEIEAARGATCSIICTQPRRISAISVSERVAAERGEKIGESVGY
KVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVIVDEIHERGMNEDFLLIVLKDL
LPRRPELRLVLMSATLNAEMFSSYFGGAPMIHIPGFTYPVRSRFLEDILEVTGHRLTPYN
QIDDYGQEKSWKMQKQALRKRKSQIASVVEDAVKAADLRDYSPQTRDSLSCWNPDSIGFN
LIENVLCHICQKERDGAVLVFMTGWDDINTLKDQLQSNPLLGDPSKVLLLACHGSMASSE
QKLIFDKPEPGVRKIVLATNLAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPTWIS
KASARQRRGRAGRVQSGECFHLYPQCVYNVFADYQLPELLRTPLQSLCLQIKSLRLGSIS
EFLSRALQSPESLSVQNAIEYLKVLGAFDQNEELTVLGKHLSMLPVEPKLGKMLIFGAIF
NCLDPILTIVAGLSVRDPFMTPFDKKDLAESAKLQFSCRDYSDHLAIVRAYDGWREAERD
RNGYDYCWRNFLSAQTLKALDSLRRQFLFLLKDTGLIDENMTMCNKWSRDENLVRAIICA
GLYPGVSSVVNKEKSVSLKTMEDGQVMLYSSSVNGKEAKIPFPWLVFNEKVKVNSVFLRD
STAISDSILLLFGGNIQQGGLDGHLKMLGGYLEFFMSRDLASTYLNLKGELENLIHCKLQ
NPRIDIQTSEELLSAVRLLVTEDPCSGRFVYGRQEPRSKKAKTMISSASVVPMDRGGGGG
HGGDNPKNQLQTLLTRAGHDNPSYKTKQIKNTLFRSTVEFNGMQFVGQPCANKKLAEKDA
AGEAISWLTGGEAPPVTANVRDRQDADHMSVLTKPAPRRRRHHHRRS
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgctcctggcctcctcggtgctgcggggtcgcctccgccccctccgccggccccggccc
ctgatcatgccctcccctctcttcctctcccgaaaccctagccccagcagcagcagcagc
acgagcctcgccagccccactcccgcctccgcggccatgagcaccagcggcgtctacgtg
ccgccgatgcgccggctgcgctccgtcatcgcgtccaccaacgggaacctcgcgccgccg
cccgcggtgcagccggcgtggacgcccgagtggcgggccgacgggcgctccctcagcccg
ccgtcgccgcctcagccgcagcagcggcgcacggctgccctcccgccccggccgccgccg
ccccagacgcagcccttgcgccagcagagcgcgggctattctcggtatgcctacgacgac
ttttccgaggaggaatcagaccgggaaatggaccgcacgtcagtttctagcaaggggggt
gcatctactttagagaatgttgacgaatggaaatggaaactgcacatgcttctccgaaac
gacaatgaacaagagattatgtcgagggaaaaaaaggacaggcgtgattttgatcaactt
gcccaactcgcagatcggatgggtttgcacagccgtcagtattcccgaatcatcgtgttt
agtaaggtccccttgcctaattatagatcagaccttgatgacaaaagacctcaaagagag
gtatctataccttctggcttgcaaagagaagttgatgcattgcttgcagactatcttgcg
cggaagagaacagacagtgggaactttcctaatgctgccttctcaaggtcaagcagcacg
gacagtttcgcgactgatgaaagcttctatgagcagcaggataatcagacatcaaccaat
gttgtgatggaaagaatccaaagaaggaaaagcttacagttgcgtaaccagcaagctgct
tggcaggaatctaatgatggtcagagcatgatggagtttcgtcgcagtcttcctgcccag
aaagaaaggcaatcactattggaagctatatctcagaatcaggtggttgtagtttcaggt
gaaactggctgtggtaagacaacacagttgccacaatacattttggaatctgaaatagaa
gccgctcgtggtgctacttgcagtatcatttgcactcaaccaagacgaatatcagctatt
tctgtttctgaaagagttgctgctgaaagaggtgaaaaaattggggaatcggttggctac
aaagttcggttggaaggaatgagaggaagggatacacgccttctgttctgcactactggg
gtcctgttgcgaagattgctggtggacagaagcttgaaaggtgtcacccatgttattgtg
gatgaaattcatgaacggggcatgaatgaagattttctccttattgtcctaaaggacctt
cttccacgccgaccggagctaaggcttgtattgatgagtgcaaccctcaatgctgagatg
ttctcttcatactttggtggagcacccatgatacatatacctggttttacataccctgtc
cggagtcgtttcctagaagatattcttgaagttactggccacagattgactccgtacaat
cagatcgatgactatggccaagagaaaagttggaagatgcaaaagcaagctctgcggaag
agaaagagccaaattgcttctgttgtggaagatgcagttaaagctgcagatctaagggat
tatagtccgcaaactcgtgactctctatcctgctggaatcctgattcaattggttttaac
ttgatagaaaatgtcttgtgccatatttgtcaaaaggaaagagacggtgctgtgcttgta
tttatgactgggtgggatgacattaatacgctgaaagatcagttacaatccaacccattg
cttggtgaccctagtaaagttttgctgcttgcatgtcatggttcaatggctagctcagag
cagaaactaatatttgacaaacctgagcctggtgtaaggaaaatagttcttgccaccaat
ttggctgaaactagtattactatcaatgacgtagtttttgttgttgattgtggaaaagca
aaagagacatcttatgatgcactgaacaatactccctgtctgcttccgacctggatctcc
aaggcttctgctagacaaagacggggaagagctggccgagttcaatcaggggaatgtttc
catctctatccacagtgtgtatataatgtcttcgctgactaccagttgcctgaacttctg
agaacccctctccaatccctctgtttgcaaataaaaagcttgcggcttggtagcatctca
gaatttttatccagagctttgcagtcacctgagtctctatcggtacaaaatgccatcgaa
tatctcaaagtccttggagcattcgatcagaatgaagagttaacagttctaggaaagcac
ctgtctatgcttccagttgagcctaaattaggcaagatgcttatttttggggctatattc
aattgccttgatcccatattaaccatcgttgctggacttagcgtaagagatccattcatg
acaccatttgacaagaaggatcttgcggagtctgctaagttgcagttttcatgccgtgac
tatagtgaccaccttgcgattgttcgtgcatatgatggatggagagaggctgaaagagac
cgcaatggctatgactactgctggagaaattttctgtcagcgcaaaccttgaaagccctt
gattctctccggaggcagttcctctttcttttaaaggacactgggttgattgatgaaaac
atgactatgtgcaataaatggagtcgcgatgaaaatctagttcgggcaatcatttgtgcg
ggtttataccctggtgtttcgtctgttgtgaacaaggagaaatcggtttctctgaagaca
atggaggatggacaggtcatgctttactcgagttcagtcaatgggaaagaagccaagatt
ccattcccctggctagtgttcaatgagaaagtgaaggtgaattcagtgtttctccgggat
tcaacagcgatatctgattctatattgctgctctttggaggaaacatacaacaagggggc
ttggacggacacttgaaaatgctcgggggatatctggagttcttcatgagtcgtgatctt
gcatcgacttacttgaatctcaagggtgaacttgaaaatttaatccactgcaagcttcaa
aacccaaggattgacatccaaaccagcgaggagctgctgtcagccgtacggctgctggtc
acggaggacccatgcagcggtcggttcgtctacggccggcaagaaccaaggtcaaagaaa
gcaaagacgatgatctcttccgcctcggtggtccccatggaccgcggaggcggcggcggg
cacggaggtgacaaccccaagaaccagctgcagaccctcctgacgagggccgggcacgac
aacccgtcctacaagacgaagcagatcaagaacaccctcttcaggtcgaccgtggagttc
aacggcatgcagtttgtggggcagccgtgcgccaacaagaagctggcggagaaggacgcg
gcgggggaggcgatcagctggctcacgggcggggaggctcctccggtgacggccaacgtg
agagaccggcaggacgccgaccacatgtcggtgctgacgaagccggctccgcgcaggagg
cggcaccaccataggcggagctga
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integrated database retrieval system
