KEGG   Aegilops tauschii (wheat D): 109751264
Entry
109751264         CDS       T04345                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03030  DNA replication
ats03410  Base excision repair
ats03420  Nucleotide excision repair
ats03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109751264
   03410 Base excision repair
    109751264
   03420 Nucleotide excision repair
    109751264
   03430 Mismatch repair
    109751264
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ats03032]
    109751264
   03036 Chromosome and associated proteins [BR:ats03036]
    109751264
   03400 DNA repair and recombination proteins [BR:ats03400]
    109751264
DNA replication proteins [BR:ats03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    109751264
  DNA Replication Termination Factors
   ELG1-RFC complex
    109751264
Chromosome and associated proteins [BR:ats03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    109751264
DNA repair and recombination proteins [BR:ats03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     109751264
  Check point factors
   HRAD17(Rad24)-RFC complex
    109751264
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_22 Rad17 RuvB_N Mg_chelatase AAA_16 AAA_14 AAA_5 AAA_assoc_2 AAA_11 ResIII AAA_24 SLFN-g3_helicase AAA_2 nSTAND3 PhoH DNAX_ATPase_lid AAA_23 AAA_30 AAA_19 AAA_28 AAA_25 AAA_7 DUF3853 IstB_IS21 Cdc6_lid RNA_helicase Parvo_NS1
Other DBs
NCBI-GeneID: 109751264
NCBI-ProteinID: XP_020165751
LinkDB
Position
5D:complement(204442276..204446274)
AA seq 339 aa
MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTNTLETADLPHMLFYGPPGTGKTTTAL
AIAYQLYGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGSARKGGYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDVMSN
RILHICNEEGLTLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSISASDLISVSGAIP
EDIVKSLLVACKSGEFDVANKEVSNIIADGYPVSQLLSQFLDVIVNADDIPDEHKARICR
KLGEADKCLVDGADEYLQLLDMASETIRALFNIPQGLVF
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggcgccgctcgtgccgtcgtcacaaccatgggtggagaaataccggccgaggcaggtg
aaggacgtcgcgcaccaggaggaggtggtccgggtgctcaccaacaccctcgagaccgcc
gacttgccgcacatgctgttctacggtccgcctggcacggggaagaccaccactgcgctc
gccattgcctatcagctctacggtccagagctctacaagtcaagagttttggagcttaat
gccagtgatgaacggggaattaatgtggtgaggacaaagatcaaggattttgctgctgtg
gctgttggttctgcacggaaaggtggttatccctgcccaccatacaagattattatacta
gacgaagcagattcgatgacagaagatgcccagaatgcattgaggcgtaccatggagact
tactccaaagtgacaagattctttttcatatgcaattatatcagcaggataatagagcca
cttgcatcaagatgtgcaaagtttaggttcaagcctctttcagaagatgtgatgagcaac
cgcattttgcatatatgcaatgaagaagggctcactctggatgctcaggcgctatccaca
ttaagtgccatctcccaaggagatcttcgtcgtgctataacttatcttcagagtgcagct
cgcttatttggatcttctatttctgccagcgacctgattagtgtttcaggggctatccct
gaagatattgtcaagtcattgcttgtagcatgcaaatctggtgaatttgatgtggcaaac
aaggaagttagcaatattattgcagacggatatccagtttctcagctgctctcgcagttt
ctagatgtgattgttaatgcggatgatattccagatgagcacaaggcaagaatatgtaga
aagcttggggaagctgataagtgcttggtcgatggggcagatgagtatttacagctctta
gatatggctagtgagacaattcgtgctctgtttaacatcccgcaagggctggtcttctaa

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