Aegilops tauschii (wheat D): 109751645
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Entry
109751645 CDS
T04345
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03030
DNA replication
ats03410
Base excision repair
ats03420
Nucleotide excision repair
ats03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109751645
03410 Base excision repair
109751645
03420 Nucleotide excision repair
109751645
03430 Mismatch repair
109751645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ats03032
]
109751645
03400 DNA repair and recombination proteins [BR:
ats03400
]
109751645
DNA replication proteins [BR:
ats03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109751645
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109751645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
AAA_30
RCF1-5-like_lid
AAA_19
RuvB_N
nSTAND3
AAA_assoc_2
AAA_5
PTCB-BRCT
AAA_16
Sigma54_activ_2
BRCT_2
AAA_24
AAA_18
Gp44_lid
AAA_14
AAA_17
AAA_2
Zeta_toxin
RsgA_GTPase
NTPase_1
RNA_helicase
Mg_chelatase
AAA_33
TsaE
Motif
Other DBs
NCBI-GeneID:
109751645
NCBI-ProteinID:
XP_020166115
LinkDB
All DBs
Position
7D:497733021..497744542
Genome browser
AA seq
1055 aa
AA seq
DB search
MSSDIRKWFMKPHDKNAGAAKPSAAGAAPAAAKKPVLSIPEKAATSSVPGNQDASVRRKT
SKYFAPKTEKDADVAEKSSSKRKLQKSSEDLEDDIKPFAANKALKDEEDDDDDFVAPSKK
KTPVKPPPLKKLKAASNDDDQDERMDEDAETPSKAAGRGRGRGRGGRGAGAAHGKTTSHD
DDGGEDRMDEDAKTPSKAAGRGRGRGRGRVGRGGGTAHGKTTTGLDDDGEEDRMDEDDKT
PSKAAARGRGGRGAGATPGGRGRGGGGRGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTF
VISGTLDSLEREEAGDLIKRYGGRVTGSISKKTSYLLADEDIGGVKSNKAKDLGVPFLTE
DGLFDMIRKSKPAKAPVNKHEGNSNSEKLQKSQTKSSPVKAERRAVDQVGTMGKSTPSKS
NKESNSTNNQKVKVVDRGSLQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWEDQFLHSGQ
KGKGKKQVDGGAKKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKG
VGGSTSNSIKELISNATLNYSDNRTKKPKAVLIMDEVDGMSAGDRGGVADLIASIKISKI
PIVCICNDRYSQKLKSLVNYCLLLNFRKPTKQQMGKRLMEIARKEGIQAQENAMEELAER
VHGDIRMALNHLQYMSLSQSVVKYDDIRLRLNSSSKDEDISPFTAVDKLFGFNGGRLRMD
ERIDLSMSDPDLVPLIIQENYINYRPSAVGKDDSGVKRMNYLARAAESIADGDIVNVQIR
RYRQWQLSQAACLASSIVPAALMHGNREVLEAGERNFNRFGGWLGKYSTTNKNKRLLEDV
HSHILASQQANLDREALRLDYLTLLLRQLTGPLKTMPKEEAVQKVVEFMDTYSLSQEDFD
TLVELSKFKGHPNPMDGIQPAVKSALTKAYKQGSSSRVVRSADLINIPGMKKTLKKRVAA
ILEPLDESLPEETGVASAEGDEEELSDAENDDELVPGDSKPKLDLQSDNKKGIQVQLNLK
SNGNGSSAKKAPAARSKAPGSAGKAVGGSGGKRKR
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggacatcaggaaatggttcatgaagccgcacgacaagaatgccggtgcggcc
aagccctctgccgccggcgccgcgccggcggcggccaagaagcctgtgctcagcatcccc
gagaaggccgcgacatcttcggtgcctggcaatcaagatgcttcagttagaaggaagaca
agcaagtactttgcacccaaaacagaaaaagatgcagatgttgctgagaagagttcttct
aaaaggaaacttcagaaaagcagcgaggaccttgaggatgacatcaagcctttcgcagca
aacaaggcccttaaggatgaagaagacgacgacgacgactttgtggcgccttcgaaaaag
aaaactccagtgaagccaccaccactaaagaagttgaaggctgcatctaatgatgatgac
caggacgaaaggatggatgaagatgccgagaccccttccaaagcagctggaaggggaaga
ggaaggggaaggggaggaagaggagcaggagcagcccatggaaagactaccagtcatgat
gatgatggtggggaggacaggatggatgaagatgctaagaccccttccaaagcagccgga
aggggaagaggaaggggaaggggaagggttggaagaggaggaggaacggctcatggaaag
actactactggtcttgatgatgatggtgaggaggataggatggatgaagatgacaagacc
ccttccaaagcagctgcaaggggaagaggaggcagaggagcaggagctactcctggggga
agaggtagaggagggggtgggagaggtttcatgaattttggtgaaaggaaggacccccct
cacaaaggggagaaggaagtcccagagggtgcccctgactgtttagctggtctgacattt
gtcataagtggtacccttgacagtcttgaacgggaggaagcgggtgatctaataaagcgt
tacgggggacgtgttaccggttcaattagtaaaaagacgagttacctattggctgatgaa
gatattgggggagtgaaatctaataaagcaaaagatctgggcgtcccgttcttgactgaa
gatgggttatttgatatgatccggaaatcaaagcctgcaaaggctcctgtaaacaaacat
gaaggtaacagcaattcagaaaagctacagaagtcacagacgaagagctctccagttaaa
gctgaaagaagagctgtcgatcaagtcggtaccatgggcaagagtactccctcaaagagt
aataaagaaagcaactccaccaacaaccaaaaggtcaaggttgttgaccgcggttctttg
caatggacagagaaatatcggccaaaagttccaaacgacatagttggcaaccaatcaatg
gttaaacaacttcatgattggttgaaaagttgggaggatcaattccttcattctggccaa
aagggcaaaggaaagaagcaggtcgatggtggagctaaaaaagctgtattgctgagtgga
cctccaggcattggtaagactacaactgcaaaagttgttagtcagatgcttggattgcag
gccattgaggttaatgcaagtgatagtcgtggtaaagcagactccaagatcgagaaaggt
gttggggggagcacatcaaattctataaaagagcttatcagcaatgctactctgaattat
agtgacaaccggacaaagaagcctaaggctgtactaatcatggacgaagttgatggtatg
tctgctggtgatagaggtggagttgctgatcttattgccagcatcaagatatccaagatt
cctatagtttgcatttgtaatgatcgttatagccagaagctgaagagccttgtaaattac
tgtttgctactcaacttcaggaaaccaacaaagcagcagatgggcaagaggttgatggag
attgccagaaaagaaggcattcaagctcaagagaatgcaatggaagagcttgcagaaaga
gtacatggggatattcgcatggcactcaaccatttgcaatacatgagtctctctcagtct
gtggtcaaatatgatgatataaggttgcgtcttaatagtagctcaaaagatgaagatatc
tctcccttcacggctgtggacaagctattcggtttcaatggtgggagactaaggatggat
gagagaatcgacttgagcatgagcgatcctgatttagttccccttattatccaggaaaat
tatatcaattatcggcctagtgccgttgggaaggatgacagtggagttaaaagaatgaat
tatcttgcccgtgccgctgagtctatagcggacggtgatattgttaatgtgcaaataaga
agatatcgacagtggcagctgtcccaagctgcctgtttggcttcatcaatagtacctgct
gctttgatgcatggaaatagagaagtccttgaagcaggtgaaagaaactttaataggttt
ggtggatggttgggcaagtactcaaccactaacaaaaacaaaaggctactggaagatgtc
catagtcatattcttgcatcacagcaagctaatttggatagggaggcgttgaggctcgat
tatctcactcttctcttgagacagttgactggcccactgaagacaatgccgaaggaggaa
gctgtccaaaaggtggtggagtttatggatacctactctttaagccaggaagactttgac
acgcttgttgaattatctaaatttaagggccatccaaatcctatggatggtattcaacca
gctgttaaaagtgccttgacgaaggcatacaaacaaggaagtagctctcgtgttgttcga
tcagcagatctaataaatatccctggcatgaaaaaaactttaaagaaacgagtggcagca
atcctggagccattggatgagagtttgcctgaagaaactggagtagcatctgcagaaggt
gatgaagaggaattgtctgatgctgaaaatgatgatgaacttgtgcctggtgactcgaag
ccaaaactggacctgcagagtgataataagaaaggaattcaagtgcagctcaacctgaag
agcaatggcaacgggtcgagcgcaaagaaggcgccagcagcaagatcaaaagctcctggg
tctgcagggaaggccgtcggaggctcaggcgggaagcggaagaggtag
DBGET
integrated database retrieval system
