Aegilops tauschii (wheat D): 109752033
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Entry
109752033 CDS
T04345
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-A isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109752033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ats03032
]
109752033
03400 DNA repair and recombination proteins [BR:
ats03400
]
109752033
DNA replication proteins [BR:
ats03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
109752033
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
109752033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
BRCT_3
TopBP1_BRCT0
NIBRIN_BRCT_II
Paramyxo_C
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
109752033
NCBI-ProteinID:
XP_020166490
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All DBs
Position
4D:complement(75172437..75180871)
Genome browser
AA seq
978 aa
AA seq
DB search
MTPSHAPAPAAPAASSGGGRRTATFAGASVFLSRKLVAPEVFDAVHDALRLNGADVLLCA
DPTRTGPLDYHVISSSSHERFADLKDKGCNLLGPQCILSCAKEHRSLPKQAYTCCLAMDG
VTILCSGFEKDERARIEQLVTAMGGLLQTKVSMDVNFVVAKDVLAAKYKWAVNSLKKPIV
NRNWLEQCWIEHRVVPHEPYRILPFTGLNICITKLDADKRKELMEIIEQNGGQYSANLTK
KCTHLIANEPGGDKYLVAKKWGNIHIVDRRWVDQSVARRAYLDESAYVIGQSSSNYNGIK
GSLKEQRNPMSSASFQSVPAVSVDDSVSMSQYAPVSSGYASKICNTDIVSAPCVQETNEM
PVESHVAEDSEAEDDDLYLSNCRISLVGFEEKELSRLVMMIRNGGGSRHVMLSERLTHII
LGAPSEEEKKEVRRLAAWGVINVVKVKWLEDCNKIKTEVKVSAAHLASELLSKEFPFVGM
EKSAATRETKAAKSSHGIFHVPTVNDSHDKQLAKDPSSERKPAMGKHENMNNTRAATRSA
KSSQQNGLTSSGKATSSAVNSQSSTTSNIFEGRTFCFSNSFSHDRRPEVIDWVRKGGGTM
AVDDAQATAVDFIIECHGQNNMQCDYSHSTVVSTQWIASCIEVGHLQDVGSHPIFSPLRC
RIPFPGFEDFRFCVSQYDEKERVLLKNLCLTLGAKFTEKASKRVNHLICKFASGPKYEAY
HNKRIPTITTEWLFECVRQDTIIPYDQFQPKPPTSQDKDAGMCTVSQFPTQAANTTSKFD
CPEPLSEPQVPRSSSKHSSGSSVSEEKIASSVNKRRRSGTAKANDTSTNIGRTEKHSDSS
SALGVADSIKDFEDLLAQSSRDPALDASVVGQDEEPQPVPDNAFTSLYNDMKTRSNNWPQ
KQHMPPGKNVKSPDSTRAPVPTPYLPFSETQTDSQIIGYEEDLTGMQKIIDRVSSQKKTI
DSSGTDSSVMGHQWDSLK
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgtcgcacgcccccgcccccgccgcgccggccgcctcctccggcggcgggcgg
aggaccgcgacgttcgcgggcgccagcgtgttcctctcgcggaagctggtggcccccgag
gtgttcgacgccgttcacgacgcgctccgcctcaacggcgccgatgtcctcctctgcgcc
gaccctacccgcacggggcccctcgactaccacgtcatctcctcctcctcccacgagagg
ttcgcggatctgaaggacaaaggctgcaatctgctaggaccacaatgcatcctttcctgt
gctaaggagcatcgttccctgcctaaacaagcttatacttgttgtcttgcaatggatggg
gttactatactctgttcaggcttcgagaaagatgagagggccaggattgaacaattagtg
acagctatgggaggtcttttgcagactaaagtgtccatggatgttaactttgtcgttgca
aaggatgtcttggctgccaaatataaatgggccgtgaatagcctgaagaagcctattgtc
aataggaactggttggagcaatgctggatcgaacatcgtgttgtgcctcacgaaccttac
aggattcttccttttactgggttgaatatttgcatcacaaaactagatgcagataaacgg
aaggagttgatggaaataatagagcagaatggtggccagtattcagcaaatcttacaaag
aagtgcactcatttaattgcaaatgaacctggcggtgacaagtatcttgtagctaaaaaa
tggggtaatattcacattgtggatcggagatgggttgaccaatctgttgctcgaagagct
tatctagatgaaagtgcctatgtcattggccagagttcttctaactataatggcataaag
ggctcccttaaagagcaacggaacccaatgagcagtgcaagttttcaatctgttccagca
gtatcagttgatgattcagtatcaatgtcacagtatgcgccagtttcttccggttatgct
tcaaagatctgcaacactgatattgtcagtgcaccttgtgtccaagagacaaacgagatg
ccggttgagagtcatgtagctgaggactcagaggctgaagatgacgatctgtacttatca
aattgcagaatttctcttgtgggttttgaggagaaagagttgtcaaggttagtcatgatg
atacgtaatggtggtggatcccggcatgttatgttgagtgagaggcttactcatattatt
ctaggtgcaccttcagaggaagaaaaaaaagaggtaagacgccttgctgcttggggtgtg
ataaatgtggtaaaggtaaaatggttggaagactgcaataaaataaaaacggaagtcaaa
gtatccgcagctcatttggctagcgagttgctctcgaaagaatttccgtttgtgggtatg
gaaaaatctgctgctacacgtgaaacaaaggcagccaaaagttcacatggaatattccat
gttccaactgtcaatgattcacatgataagcagctcgcaaaagatccgtcatctgaaaga
aaaccagccatgggcaaacatgaaaacatgaataatacccgagcagcaactaggtctgca
aaatcaagccaacagaatggattgaccagttctggcaaagcaacttcttctgcagtgaat
tcacagagtagcaccacttcaaatattttcgaagggagaacattttgtttctcaaattca
ttttctcatgatcggagaccggaggtaatcgattgggtcagaaaagggggaggcactatg
gcagtggatgatgcacaagcaactgctgtggatttcataattgagtgccatggacagaac
aacatgcaatgtgactactctcattcaaccgttgtttcaactcaatggatagcctcatgt
attgaggtgggccacttgcaagatgttggaagtcatcctatcttctctcctttgcggtgt
cgcatcccattcccagggtttgaagacttccgtttctgtgtttcacagtatgatgagaaa
gagagagttctgcttaagaacctctgtcttactctaggagctaaattcacagagaaagca
tcgaaaagagtgaaccatcttatctgtaaatttgcaagcggtccaaagtatgaggcttac
cataataagagaattccaaccattaccacagagtggctcttcgaatgtgtgagacaggac
accattatcccttatgaccagtttcagccgaaaccacctacttctcaggacaaggatgcc
ggtatgtgcactgttagtcaatttccgacacaagccgccaatacgacctctaaatttgat
tgccctgagccacttagtgagcctcaagtaccaagaagcagttcaaaacacagctcaggc
tcctctgttagtgaggagaaaattgcttcttctgttaacaaaagaagacgatccggaaca
gccaaggctaatgatacatctacaaacattggacgaacagagaaacattcggacagcagc
tctgctctgggtgttgcagactccataaaggacttcgaggacctactggctcagtcatcc
agggatcctgcacttgatgcttctgttgtaggtcaagatgaggaacctcaacctgtgcca
gataatgctttcacttccctatacaatgacatgaaaacccgctcaaataactggccacag
aagcaacacatgccccctggcaagaatgtcaagagcccagactccacccgggcccctgtc
ccaactccctatctacctttcagcgaaacgcagacagattctcagatcatcgggtatgaa
gaagatttgactggcatgcagaagatcattgacagagttagttctcaaaaaaagaccatc
gacagttcaggcaccgacagttcagtcatggggcatcaatgggactccctcaaatga
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