Aegilops tauschii (wheat D): 109752136
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Entry
109752136 CDS
T04345
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats04120
Ubiquitin mediated proteolysis
ats04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109752136
04120 Ubiquitin mediated proteolysis
109752136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ats04121
]
109752136
Enzymes [BR:
ats01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109752136
Ubiquitin system [BR:
ats04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109752136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
FlxA
zf-RING_11
zf-RING_5
zf-RING_16
zf-HC5HC2H
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
109752136
NCBI-ProteinID:
XP_020166595
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All DBs
Position
7:complement(191209039..191214360)
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AA seq
491 aa
AA seq
DB search
MIRLQTYAVFSLLATITSVYYAFSSREQFYPAMVYLSTSKICFVLLLNTGLVAMCVAWQL
VKRVFLGTLREAEVERLNEQSWREVVEILFAVTIFRQDFSVSFLAMVAALLLVKALHWLA
QKRVEYIETTPSVPMLSHIRIVSFMLFLLVVDCLFLANSLGSLIQKREASVAIFFSFEYM
ILATSTVSTFVKYVFYVSDMLAEGQWENKAVYTFYLELISDLVHLSLYMLFFIAIFLNYG
VPLHLIRELYETFRNFRIRISDYIRYRKVTSNMNERFPDATPDELDASDVTCIICREEMT
TAKKLLCGHLFHVHCLRSWLQRQHTCPTCRAPIIPPDNGRAASAQQHGAQPGVQPGTGTP
SSGGAPTENVNMRQAKLEAAASAASLYGRSFAYPPVNTLNRNSGPLHATPSTSQPGEAST
STGHPLEPQPSYSRGPVSSTTGSRDPGNSLQKAYEKAIRSQIEVLQIQLQMMQQGATSST
TSNENAEQAGK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgatccggttgcagacgtacgccgtgttcagcctgctggcgacgataacgtcggtgtac
tatgcgttcagcagcagggagcagttctacccggccatggtctacctctccacctccaag
atatgcttcgtgctgctcctcaacacgggcctcgtcgccatgtgcgtcgcctggcagctc
gtgaagcgcgtcttcctggggacgctccgcgaggccgaggtcgagcggctcaacgagcag
tcgtggcgtgaggttgtggagatcctcttcgcggtcaccatcttccgccaggatttctcc
gtctctttccttgccatggtcgccgccctgctcctcgtcaaggctctgcactggcttgcg
cagaagagggtcgagtacattgagaccacgccctccgtgccaatgctgtcgcacataagg
atcgtgtccttcatgctattccttcttgtcgtcgactgcctcttcctggcgaactcgctg
gggtcactgatacagaagcgggaggcatctgttgcaatcttcttttcctttgagtatatg
atactggcaacatcgacagtatcgacattcgtgaagtatgtattctatgtcagcgacatg
ctagcggaaggtcaatgggagaataaagcagtgtatacattttatttggagcttatcagt
gaccttgtgcacttgtctttatatatgctattcttcatagcgatcttcctgaactatggt
gtcccactgcatttgattcgtgagctgtatgagaccttccgcaacttcagaattcgcatt
tcagattatatacgctacagaaaggtgacttccaacatgaatgaacgctttccagatgct
acaccagatgagcttgatgcgagtgatgtcacatgtattatttgccgtgaagagatgacc
acagcaaagaagctgctctgtgggcacttgttccatgtacattgtttgaggtcatggcta
cagcgccaacatacttgcccaacatgtagagctccaattatccccccagataatggacgt
gcagcatcagcacaacagcatggagctcaacctggagttcagcctggcactggtactcca
agttcaggaggagcaccaactgagaacgtgaacatgcgtcaagcaaaacttgaggctgct
gcttcagctgcttccttatatgggagatcatttgcttatcctccagtgaacactttgaat
aggaactcaggacctctgcacgctacaccaagtacttcacaaccaggagaagcaagtact
tccaccggccatccattagaacctcagccttcttattcacgtggtccagttagttcaaca
actggtagcagggaccctggaaattcactacagaaggcatatgaaaaggctataaggagt
cagatagaggtgttgcaaatccaattgcaaatgatgcagcaaggggccacctcatcgaca
actagcaatgagaacgctgagcaagccggaaaataa
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