Aegilops tauschii (wheat D): 109752631
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Entry
109752631 CDS
T04345
Name
(RefSeq) oligouridylate-binding protein 1B
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109752631
03041 Spliceosome [BR:
ats03041
]
109752631
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
109752631
Spliceosome [BR:
ats03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109752631
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_5
RRM_PARP14_3
RRM_Nup35
RRM_8
Motif
Other DBs
NCBI-GeneID:
109752631
NCBI-ProteinID:
XP_020167119
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All DBs
Position
4D:complement(186821714..186828872)
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AA seq
449 aa
AA seq
DB search
MQQRMKQVAAVAAQQQQQMMQQALLMHQHQQQQQAAAAVPPMFPPHHAHPGLLAAPHIEP
IVSGNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGFVDY
YDRRYAALAIVSLNGRQLFGQPIKVNWAYASTQREDTSGHFNIFVGDLCPEVTDAALFAF
FSAYSTCSDARVMWDQQTGRSRGFGFVSFRNQQDAQTSINELNGKWLGNRQIRCNWATKG
ANAGEEKQSTDSKGVVELINGSSEAGKENANEDGPENNPQYTTVYVGNLPHDINSNDVHR
FFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAARAIQTGNGQLIGGRQIKCSWGSKPTPP
GTASAPLPPPALAPYTPGVSAVDLISYERSLALSKMAANPALMGQVAALRQAAMGMGTGA
SQAIFDGSFQSVNPQQQQQQQQQQQLMYY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagaggatgaagcaggtggcggcggtagcggcgcagcagcagcagcagatgatg
cagcaggctctgctcatgcaccagcaccagcagcagcagcaggcggcggccgcggtgccg
cccatgttcccgccgcaccacgcgcacccgggtctccttgccgcgccgcatatagagccc
atcgttagtgggaacctgcctcctgggtttgattcaagcacatgccgcagtgtgtatgtt
ggcaacatccatcttcaagtcacagattcactactgcatgaagttttccagagtattggt
ccagttgaagggtgtaagctcatcaggaaagaaaagtcatcttttggttttgttgactat
tatgaccgtagatatgctgcacttgctattgtgtctctcaacggtagacaactgtttggc
cagccaataaaagtcaattgggcatacgcaagtacccagagagaggatacatcaggtcat
tttaacatcttcgtcggggatctttgccctgaggttacggatgctgctttgtttgctttt
ttctcggcatattctacctgttcagatgctagagttatgtgggatcagcagactggacga
tccagagggtttggtttcgtttcttttaggaatcagcaggatgcacaaacttccataaat
gaattgaatggaaagtggcttggcaaccgccaaattcgttgcaattgggcaacgaagggc
gctaatgccggtgaagagaagcaaagtacagactccaagggtgtggtggagttgataaac
ggctcatcagaggctggcaaggagaatgcaaatgaagatggtcctgaaaataacccacag
tatacaactgtttatgttggcaatcttccccatgatatcaacagcaatgatgtgcatcga
tttttccatttacttggggctgggtcaattgaggaggtccgtgtaacacgcgataaagga
tttggctttgtgagatatagtacccatgaagaagctgcacgagcaatacagacgggtaat
ggccaacttattggcgggaggcagatcaagtgctcttggggaagcaaaccaactccacca
gggacagcatctgcgcctctgcctcctccggcattagcgccatacacccctggcgtgtca
gcagttgacctcatctcctacgagcgatcccttgctctgagcaagatggctgccaacccg
gccctgatgggtcaggtcgccgccctgaggcaggccgcgatgggtatgggcaccggcgcc
agccaggccatctttgacgggagcttccagagtgtcaaccctcagcagcagcagcagcag
caacagcagcagcagctcatgtactactga
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