Aegilops tauschii (wheat D): 109753358
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Entry
109753358 CDS
T04345
Name
(RefSeq) uncharacterized protein
KO
K14311
nuclear pore complex protein Nup188
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109753358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109753358
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109753358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RICTOR_M
KdgT
Motif
Other DBs
NCBI-GeneID:
109753358
NCBI-ProteinID:
XP_020167851
LinkDB
All DBs
Position
7:108974153..108981542
Genome browser
AA seq
1962 aa
AA seq
DB search
MASGGAPASTSGAGGGAGTKTVSASLWWDPFVALCDDLDRAAASPSAAVSDALAERIKGH
HEWLRGAVSMFGKPNGASRAALDAGQVAVGEHRLAVKPDLKEAALRASKSLDLDEVQSYI
LVKRSSESAPTTRDADPQELLRRVSLQYYLERQCLLKCIRRIFVHATCTDDDSDSSDAIK
QEASLLGSDEMERRLLSIIKDSLAAAFSVKSAADLTVSWLEESLIEINLILDILFLAICD
NFSRCNGGLWIALCSLFRDMLSGSYDVGKFAVSAEAKRSFHYAKAQLLLILIETLDLENL
LRMVHDEVSFSGGYSQYSVAEILEMDIEVSRLPEFEVESGPLLLAWAVFHCLLLSLPGNN
ANLEIDHASYAQRAFELAPFNYLLGVLCSSIFRESDGPVSGFRAVLRSFISAFIASYEIS
YQTEDSSLGVILNIICEVYGGEESLCMQFWDKDSCVDGPIRSVLQMVEKEYPFQITDLLR
FLSAVSYGTWPAQCVYNYLERMNGLTTLYATPGSVPDSLNYCDQIEIHHPISIPGMEGIT
LPRGTRGYILRSLEDNAALVRWEFPHSGVFILLLTLAQDLYSCNYVEACDIMDLLYQMVS
SNQDLCSALLHADKSLAVQKSKSLGQIGEYIRIDVVKILCSSIFKYEQDGNNASIMSKTF
SMLSEFLKCVPYRVFDVALECGIFSSRLNDPSSDWLLSGALARMLFAASEENGDCSSLTT
SLLDFAIQVLRKGAAADDMISPFIVFSIQYIMVNHMNWKHKKYSRWKTTLKVFELVKSCI
QVKPFLSKLGGIIWQMLLYDSSIHSVLWHAVCTSMQLLESRGSFSNGVEDIEDIQLVLCC
GLDIIFFMLSNLPEDLMPVAPFVTLVLSSSLKPLPFITATILSMSFQNSALQVSAARALS
VLCFTAHRVQPQLMENGSFLVDGSEICRLQASISQILNKEDDTNNCLIVAIFSLLTSVAR
YQPALFVSLTEENAMIQADHSNSANSQTNGSSTLNSSRSNSRLVEQMLGYIENSTEFMNS
SPSLLLSILDLLEALWESGVQFICILDKLRSSRTFWESLSRCIRGTFDHCPVDTVDEKVS
SRYNCQAKIFKIMSHELFLKGRLLVEAKTSNPVADGTTGQKEPSASSPSNAVCKWFDSAL
LEDFINHLSSNGYQKELFHRAKVASCVCIIRLITKLSTGDTASLSLSAVKKIQLISSKLL
QHRAFIALLSQYALHGYSGEQELTSLVINDLYYHIHGELEGRQITPGPFQELLCFLLEFK
FFECNATEQPHSAFPAVSGNVLFDVAHTRDDLGVKLWNHSDWKPCKEVAEKMLDIMHKAN
LMKRHADAKLCTLRSFITFLSVYTGTSSSNELTLPDGGISATAMESAIRCACKYLQSTVD
SLFPEVDTNEVLFPLLSGQVDLLLTLTRFLFHQAKQTKSYVHLYPVIVLLMRTSGASTSF
LVDLVPSSPALKKPVKSLLVLILSLFEFIYGKDDMKDGSGDANLFGESSIISMRLLPVLC
KLAENREYSDLAVGSMDLLLKGFIPPNVWLPILQKHFRLQAILHKCQNGAILSTQVILNF
LLTLGRTKEGAKMLQSANIFAFLKVLLSKLSLDDSCFRNSLSSQAKDVHMWSLALAIVAS
LNHCMDDDVSRSSVANGTVSFLAGQVPLMSSYLSAQSVNTHQNKKRAVLQQSQTSLSALS
LTENILSLLCVLAKYHFPRDTGMMQVDSELREIIIHLLAFISRGSARTGDSPNWNPSFCC
PPIAKEEVVLHEDPPLIRSKHGWFRFAASSSLSTAAISAPSNAALSLVIRDKNSGDSGSV
KQTRFTEMVAVQIYRIAFLIMKFLCSQAKEAVKRAGELEFVDLAHFPELPMPDILHGLQD
QVVSIVTEVLGANGSSALSGETDRVCRLLLVTLEASLYMELCVSQSCGIRPVLGRFEDFS
KGIKAMLHALEKHSSLKPLVRSLAQITTLLYPGLAQSNFLTM
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggcggcgcccccgcatcgacctccggcgccgggggcggcgctggcaccaag
accgtgtccgcctcgctgtggtgggaccccttcgtcgccctctgcgacgacctcgaccgc
gccgccgcctccccctccgccgccgtctccgacgccctcgcggagcggattaagggccac
cacgagtggctccgcggggcggtctcgatgttcgggaagccgaacggcgcctcgagggcc
gcgctcgacgccggccaggtcgccgtcggggagcaccgcctggccgtcaagcccgacctc
aaggaggccgcgctccgcgcgagcaagtccctcgacctggacgaggtgcagtcgtacatc
ctggtgaaacggtcttcagagagcgccccaacgacccgtgacgctgaccctcaggagctc
cttcggcgggtgtctctgcaatactaccttgagcgtcagtgcctgctcaagtgcattcgg
agaatctttgttcatgccacatgcacagatgatgattctgattcatccgacgccataaag
caagaggcctcgctgttaggcagtgacgagatggagcggagattgctgtccatcattaaa
gattcccttgcggctgcattttcggtgaaatcagcagctgatttgacggtttcttggctg
gaagaaagcttgattgagattaacctgatcctggacattctgtttcttgctatctgtgat
aacttctcaaggtgcaatggtgggctgtggatagctctgtgctcgctgtttagggatatg
ctctctggctcttatgatgttggaaaatttgctgtgtctgctgaagcaaagagatcattt
cattatgctaaagctcagctactccttattctcatcgagactttggacctcgaaaatctc
ctccgaatggttcatgacgaagtctctttcagtggagggtattcccagtattctgttgct
gaaattcttgagatggatattgaagtatcaagattgcctgaatttgaagtggaatcagga
ccactacttcttgcttgggcagtttttcactgcctgctcctgtctcttccaggaaataat
gccaacttggaaattgatcatgcatcttatgcccagcgggcttttgagcttgcacccttc
aattatttacttggagttctttgctcaagcatcttcagggagtcagatggtcctgtttct
ggttttcgtgctgtactgagatctttcatttcagctttcattgcttcatatgagatatct
tatcagacagaagacagttctcttggtgtgatactgaatattatatgcgaagtttatggt
ggagaggaatcactatgtatgcaattctgggacaaagatagttgtgttgatggtccaatc
agatctgttcttcaaatggtggagaaagagtatcctttccaaataacagatctgcttcgc
ttcttatcagctgtttcttatgggacatggcctgctcaatgtgtatataattacctggag
aggatgaatgggctaacaacactgtatgcaacccctggcagtgtccctgatagtctgaac
tactgtgatcaaattgaaattcatcatccaatcagcattcctggtatggaaggcattaca
ttaccccgtggaacacgtggttacattttgagaagtcttgaagacaatgctgcattagtc
cgttgggagttcccacattcaggcgttttcattttgctcctcactttagcacaagatcta
tattcatgcaattatgtggaagcctgcgatataatggacttactgtatcagatggtatca
tcaaatcaggatctgtgctctgctttgctgcatgctgacaagtcacttgctgttcaaaaa
tcaaagagtttgggccaaattggagaatatatcaggattgatgttgttaaaatcctttgc
tcatcaattttcaaatatgagcaagatggtaataatgccagcataatgtcaaaaaccttc
agcatgttatcagaatttctgaagtgtgttccataccgtgtgttcgacgtggcgttagaa
tgcggcatcttcagctcacgattaaatgacccctcaagtgattggctactttctggtgca
ctagctagaatgctttttgccgcctctgaggaaaatggagactgttcatcacttaccact
tcattgcttgattttgccattcaggttttgcggaaaggagccgccgctgatgacatgata
tcaccgttcattgttttttcaattcaatacatcatggtcaatcatatgaactggaaacac
aagaagtatagtcgctggaagacaaccttgaaggtgtttgaattggtgaagagctgtatt
caagtcaaaccattcttgtcaaagcttggtggcatcatttggcaaatgctactatatgat
tcttctattcacagtgttctttggcatgctgtgtgcacgtccatgcaattattggaatcg
cgtggcagcttcagtaatggtgttgaagatattgaagatatacaacttgttctttgctgt
ggacttgatattatatttttcatgctgtccaacttaccagaggacttgatgccagttgca
ccttttgttactttggttttgtcatcttcattgaagcccttacctttcatcacagctaca
atattgtctatgtcctttcagaattctgctttacaagttagtgcagctagagcattatca
gtattgtgcttcactgcccacagagtccaacctcaactcatggaaaatggtagctttctt
gttgatggttcagagatatgtagattgcaagcaagtatttcccaaattcttaacaaggaa
gatgatactaataattgtttgatcgtggctatattcagccttctgacttctgttgctcgc
tatcagcctgctctttttgtttcactgacagaggagaatgcaatgatacaagctgatcat
agtaattctgcaaattctcagaccaatggttcttctaccctcaacagttcaagaagtaat
tcgagacttgttgagcaaatgttgggatacattgaaaattcgaccgagtttatgaatagt
tctccttctctgttacttagcatccttgacctactcgaggcattatgggaaagtggtgtg
caattcatatgcatattagataagctgcgaagctctagaacgttctgggagagcttgtca
cgttgtattcgtggcacctttgatcattgccctgttgacactgttgatgagaaagtttct
tcgaggtataattgccaggctaaaattttcaagatcatgtcacatgagttgttcttgaaa
gggagattacttgtggaagcaaaaacttctaatcctgtagcagatggtacaacggggcaa
aaagaaccttctgcatcttctccaagcaacgcagtttgcaaatggtttgatagtgctctc
ttggaagattttatcaatcatttgtcaagcaacggataccagaaggagctttttcatcgt
gccaaggtagcttcatgcgtttgcatcatccgtctgataacgaagttgtccactggtgat
actgccagcttgtctttgtcggcagtgaagaagattcagctaatctctagcaaattatta
caacaccgtgcattcatagctctgctatcacagtatgccctgcatggctacagtggtgag
caagaacttaccagtttggtaatcaatgatctttactatcatatacatggagaactcgag
ggtcgtcagattactcctggtccctttcaggagctcttgtgtttccttctggagtttaag
ttttttgaatgcaatgctacagagcaaccacatagcgccttcccagcagtcagtggcaat
gttttgtttgatgttgcacacactcgtgatgatcttggagttaaactttggaatcattca
gattggaaaccctgcaaagaagtagctgaaaaaatgctggatattatgcataaagcaaat
ctgatgaagcgtcatgctgatgcaaagctttgtacattaaggtccttcataacatttcta
tctgtctacactggaacaagttccagtaatgaactcaccttacctgatggagggatttct
gcaacagctatggaatcagcaattagatgtgcatgcaaatatttgcagtcaactgttgat
tctctatttcctgaagttgatacgaatgaggttttgtttcccctattgtctgggcaagtg
gacttactgcttacacttaccaggttcttatttcaccaagctaagcaaaccaagagctat
gttcatctctatccagttattgtacttcttatgagaacctcaggtgccagcacatcattt
ttagttgatctcgtgccatcaagtcctgctcttaagaaaccagtgaagtccctccttgtt
ctgattctgtctttatttgaattcatttatggtaaggatgacatgaaagatggatcaggt
gatgctaatctgtttggtgaatcatccattataagtatgaggttgttacctgtactctgc
aaattggctgagaatagggaatattctgatcttgctgttggatcaatggacttactattg
aagggctttataccccccaatgtatggttgccaattctacaaaagcatttccgtctccag
gctatactgcataaatgtcagaatggtgcaatattgtctactcaagtaattttgaatttc
ctcttgaccttggggcggacaaaggaaggtgctaaaatgcttcagtctgcaaatattttt
gctttcttgaaggtacttctaagtaagttatctctggatgactcctgtttcagaaattct
ttgagcagccaagcgaaggatgtgcatatgtggagtttggctcttgctatagtcgcctct
ctcaaccattgtatggatgatgatgtttctcgtagcagtgttgcgaacgggactgtcagc
ttccttgcaggacaagttccgctgatgtcctcttatctatctgcgcaaagtgttaataca
catcagaacaagaaaagggcggtgttgcaacagtcgcagacatcactttcagctctgagt
ttaactgagaatatcctctcacttctatgtgttttagcaaaatatcattttccacgggac
actggtatgatgcaagtagattcagaattaagagagattattatccacctgcttgctttt
attagcagaggaagtgcaaggactggcgattcaccaaactggaacccatcattttgttgt
cctcctattgctaaggaagaagtggtgcttcatgaagatccaccactcatcaggagcaaa
catggatggttcagatttgctgcaagcagttctctttccactgcagctatttctgctcct
tccaatgcagcattatctctggtgatcagagacaaaaatagtggagattctggttctgtg
aaacagactcgttttaccgagatggtagctgtgcagatttacagaatagctttccttatt
atgaaattcctgtgcagtcaagccaaagaggcagtaaaaagggcaggagaattagaattt
gttgatcttgcacattttcctgaacttcccatgccagatattcttcatggtctgcaggat
caagtggtttctatcgttaccgaagtactgggggcaaatggatcgagcgccctcagcggg
gagaccgatagggtatgccgtcttctgttggtgaccctcgaggcatcactctacatggaa
ctgtgcgtgtcccagtcatgcggcatcaggccagtgctgggccggtttgaagatttctcc
aagggaattaaggcgatgcttcacgctttggagaaacattccagtttgaaaccattggtc
aggtcacttgctcagattacgacactcctgtatcctgggcttgctcaaagcaacttcctc
accatgtaa
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